Food Modelling Journal: New open-access venue provides a platform for food scientists

An introductory editorial and an article of a unique publication type are already made available in the next-generation journal

The open-access Food Modelling Journal (FMJ) was launched by the AGINFRA+ community and Pensoft with the aim to encourage food science specialists, agronomists and computer scientists to come together and work on assuring and improving food supply, quality and safety in our globalised and rapidly changing world.

The Food Modelling Journal will be focusing on the publication of information objects and digital resources in the food science field, related (but not limited) to: food safety, food quality, food control, food defence and food design, documenting experimental or observational data and mathematical models.

By providing a platform and tools for describing scientific records and crediting for dedicated models, data, data analytics workflows and software, FMJ fosters the overall reproducibility and reusability of research.

FMJ also aims to shed light on what we refer to as research objects – data, software scripts, visualisation routines or models. Usually, they would stay undervalued, underused and uncredited, despite their importance for the scientific progress.

The focus and scope of the journal are supported by a number of specific key features:

  • Quality but not quantity
  • Cross-disciplinary approach
  • Open data and software code policy
  • Rapid turnaround time
  • Advanced open access and machine-readability.

It should be noted that the Open Science movement and the barrier-free access to research, is at the heart of the FMJ project.

To support its authors, the AGINFRA+ community, Pensoft and Food Modelling Journal have provided them access to the ARPHA Writing Tool, where researchers are able to work together with their co-authors, colleagues and peers on manuscripts from the drafting stage to publication.

A FSKX model run using the executable paper feature available in Food Modelling Journal.

A particularly appealing feature, meant to promote reproducibility, collaboration and openness in science, is the executable papers, where users can reproduce research findings using the published model and running it either with default or new parameters. By clicking an “Execute” button within the body of the article, users are taken to an external virtual environment where they will be able to execute the computation. By ‘encapsulating’ all the details needed to perform the action within the paper, this feature ensures that the published findings will remain testifiable in the future.

“While the long-lasting tradition in science used to focus on crediting researchers’ work through conventional research articles and especially by counting their citations, many exciting, useful and often invaluable products of the research cycle, such as data, software scripts, visualisation routines or models (usually called “research objects”) normally stay undervalued, underused and uncredited, despite their importance for scientific progress,” note the editorial board in the introductory editorial.

“The consequences of this neglect of the initial and intermediate steps of the research cycle in favour of the research articles or research books are obvious: scientists often repeat efforts done by others instead of using these as a stepping stone for further analyses and generating new knowledge, let alone the impossible or restricted reproducibility and reusability of research results,” they add.

The first paper of a unique publication type: FSKX (Food Safety Knowledge), is already publicly accessible in the journal. Classified as an early research outcome, the article presents a new generic model for assessing the risk of salmonellosis associated with the consumption of table eggs. To ensure the reusability of the model, the research team of Virginie Desvignes (ANSES – French Food Safety Agency) have made it available in the Food Safety Knowledge Markup Language (FSK-ML) format alongside the executable model script, visualisation script and simulation settings.

FSK-ML is an open information exchange format that is based on harmonised terms, metadata and controlled vocabulary to harmonise annotations of risk assessment models and that was significantly improved and extended during the AGINFRA+ project.

###

Follow Food Modelling Journal on Twitter and Facebook.

###

Food Modelling Journal is indexed by BASE, CNKI, CrossRef, Dimensions, Google Scholar, J-Gate, Mendeley, Microsoft Academic, Naviga (Softweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Transpose, Ulrichsweb™ and Unpaywall; and archived at CLOCKSS, Zenodo and Portico.

Russia’s nuclear industry set to fight the climate crisis by exporting education

Challenges and perspectives for Russia’s nuclear industry on its way to assuming a key role in the fight against the climate crisis on a global level, while also ensuring future growth and building on 65 years of prodigious legacy, dating back to the launch of the world’s first nuclear power plant in Obninsk in 1954, are brought together in a paper recently published in the open-access journal Nuclear Energy and Technology.

The authors are three prominent nuclear physicists and key figures at Russia’s National Research Nuclear University MEPhI: Prof. Mikhail N. Strikhanov (Rector of MEPhI), Dr. Alexandr V. Putilov (Dean of the Faculty of Business Informatics and Integrated Systems Management), and Dr. Georgy V. Tikhomirov (Deputy Director of the Institute of Nuclear Physics and Engineering MEPhI). MEPhI is also the basic university of the Rosatom State Atomic Energy Corporation (ROSATOM) and alone provides education to 25,000 students from over fifty countries.

In their article, the team pays special attention to the urgent need for a new “educational paradigm” to secure the smooth transfer of Russia’s nuclear industry and knowledge to a global digital economy where industries blend together in new and even unexpected alliances with the ultimate promise of joining knowledge and skills for the common good of humanity. The approach is described as “front-line education” that encompasses training personnel for the specificity of the novel digital economy along the entire “front”: from youth yet to enter university to production personnel.

To do so, the Consortium, supported by 18 specialised universities and led by ROSATOM, is to not only provide first-class educational formats, material and technical resources in addition to the high professionalism of the teaching staff to on-site domestic students, but also export nuclear education on a large scale, in order to pave the way for a subsequent international technological expansion by preparing “personnel of a new type, using a kind of symbiosis of engineering, information and economic training”. According to the scientists behind the paper, students should persist throughout their whole education in their mission “to master new opportunities arising from end-to-end digital technologies, search for and create new technological solutions or production schemes, and develop fundamentally new product lines and business models for implementing new manufacturing technologies.”

An excellent exemplary training format of the new age is the Multy-D system: a 3D digital model of the future nuclear power plants and additional dimensions in the format of terms, resources, etc. Developed over the last few years by MEPhI and Atomstroyexport, it allows for foreign specialists to acquire Russian-born competence. However, latest technological advances, including the transition to a closed nuclear fuel cycle with fast neutron reactors, requires changes in modelling systems.

This is an electronic simulator of a nuclear power plant for education.
Photo by Anastasia Barei / Country of Rosatom.

All of these efforts and transitions are of top priority, given the urgent global need for affordable, environmentally friendly electricity on the background of depleting fossil resources and worrying levels of greenhouse gas emissions, point out the scientists. Meanwhile, the nuclear power industry has claimed its own ecological niche by providing the necessary amount of energy without leaving behind any carbon footprint.

“The improvement of existing and the development of new innovative technologies is a prerequisite for the development of a nuclear energy system that meets the principles of safety and sustainable development,” conclude the authors. “All solutions to these problems are in the hands of the young people who are being trained throughout the country.”

Today, the Rosatom State Nuclear Energy Corporation is developing more than 30 projects of new nuclear power plants (NPP) in Russia and 12 other countries.

Original source:

Putilov AV, Strikhanov MN, Tikhomirov GV (2019) Personnel training for the developing nuclear power industry. Nuclear Energy and Technology 5(3): 201-206. https://doi.org/10.3897/nucet.5.39239

ARPHA Platform’s content integrated into ScienceOpen to take advantage of novel streams of science communication

The research discovery platform ScienceOpen and Pensoft Publishers have entered into a strategic collaboration with the aim of strengthening the companies’ identities as the leaders of innovative content dissemination. The new cooperation will focus on the unified indexation, the integration of Pensoft’s ARPHA Platform content into ScienceOpen and the utilization of novel streams of scientific communication for the published materials.

Pensoft is an independent academic publishing company, well known worldwide for bringing novelty through its cutting-edge publishing tools and for its commitment to open access practices. In 2013, Pensoft launched the first ever, end-to-end, XML-based, authoring, reviewing and publishing workflow, now upgraded to the ARPHA Publishing Platform. As of today, ARPHA hosts over 50 open access, peer-reviewed scholarly journals: the whole Pensoft portfolio in addition to titles owned by learned societies, university presses and research institutions.

As part of the strategic collaboration, all Pensoft content and journals hosted on ARPHA are indexed in the ScienceOpen’s research and discovery environment, which puts them into thematic context of over 60 million articles and books. In addition, thousands of articles across more than 20 journals were integrated into a “Pensoft Biodiversity” Collection. Combined this way, the content benefits from the special infrastructure of ScienceOpen Collections, which supports thematic groups of articles and books equipped with a unique landing page, a built-in search engine and an overview of the featured content. The Collections can be reviewed, recommended and shared by users, which facilitates academic debate and increases the discoverability of the research.

The Pensoft Biodiversity collection on ScienceOpen.

“It is certainly great news and a much-anticipated milestone for Pensoft, ARPHA and our long-year partners and supporters from ScienceOpen to have brought our collaboration to a new level by indexing the whole ARPHA-hosted content at ScienceOpen,” comments Pensoft’s and ARPHA’s CEO and founder Prof. Lyubomir Penev. “Most of all, the integration between ARPHA and ScienceOpen at an infrastructural level means that we will be able to offer this incredible service and increased visibility to newcoming journals right away. On the other hand, by streaming fresh and valuable publicly accessible content to the ScienceOpen database, these journals will be further adding to the growth of science in the open.”

Stephanie Dawson, CEO of ScienceOpen says, “I am particularly excited to add new high-quality, open access biodiversity content from Pensoft Publishers to the ScienceOpen discovery environment as we have a very active community of researchers on ScienceOpen creating and sharing Collections in this field. We are looking forward to working with Pensoft’s innovative journals to support their open science goals.”

The collaboration reflects not only the commitment of both Pensoft and ScienceOpen to new methods of knowledge dissemination, but also the joint mission to champion open science through innovation. The two companies will cooperate at a strategic level in order to increase the international outreach of their content and services, and to make them even more accessible to the broad community.

###

About ScienceOpen:

From promotional collections to Open Access hosting and full publishing packages, ScienceOpen provides next-generation services to academic publishers embedded in an interactive discovery platform. ScienceOpen was founded in 2013 in Berlin and Boston by Alexander Grossmann and Tibor Tscheke to accelerate research communication.

Nuclear reactors with a newly proposed barrier could’ve withstood Chernobyl and Fukushima

In the aftermath of the notorious accidents in the history of nuclear energy at Three Mile Island (1979), Chernobyl (1986) and Fukushima (2011), where all three have turned into devastating disasters due to meltdown in the core of a reactor, leading in turn to the release of radiation into the environment, many countries around the world have already pledged to a nuclear power phase-out.

However, while actions towards the closure of all nuclear power plants in only a few decades’ time are already well underway, the alternative energy sources currently in operation have some major drawbacks: they rely mainly on non-renewable resources, produce significantly less energy compared with nuclear power plants and, most importantly, are considered to be amongst the main contributors of carbon emissions and, thereby, the climate crisis which humanity is now set to battle.

Nevertheless, a future powered by nuclear energy might be neither a lost cause, nor a game of “Russian roulette”, according to the research team of Francesco D’Auria (University of Pisa, Italy), Nenad Debrecin (University of Zagreb, Croatia) and Horst Glaeser (Global Research for Safety, Germany). In a recent paper, published in the open-access peer-reviewed journal Nuclear Energy and Technology and the result of 30-40 years of collaboration, they propose a new safety barrier to be implemented in large Light Water Reactors around the world. Coming at a fraction of the cost of the already obsolete one that it is about to replace, this barrier is expected to reduce the probability of core melt to that of a large meteorite hitting the site.

With their new technological solution, these scientists aim to bring together research findings from the last few decades, mostly in relation to accident analysis capabilities and nuclear fuel material performance, as well as the concepts of the very pioneers who developed the nuclear technology in the past century. The proposal is based on studies and discussions from the 11th Scientific and Technical Conference “Safety Assurance of NPP with VVER” (Russia, May 2019) and the International Conference on Nuclear Power Plants, Structures, Risk & Decommissioning, NUPP2019 (United Kingdom, June 2019). As a result, they hope to regain public confidence in nuclear power – an efficient and sustainable source of renewable energy, as well as bridging the gaping chasm between what we have learnt over the years about nuclear energy and technology and what is being implemented in practice.

Amongst the up-to-date research findings and knowledge to be implemented in the novel technological solution are the recently discovered nuclear fuel structural weakness, as well as a more elaborate Extended Safety Margin Detection (E-SMD), which allows for an emergency shutdown of a reactor, following even low and very low probability events. It also provides advance information to the operators about the actions needed to prevent or mitigate possible damage. The recruitment of an Emergency Rescue Team (ERT) is also proposed to consist of a group of highly trained and specialised rescuers who will be in possession of suitable machinery and equipment, as well as access to each nuclear reactor installed within an assigned geographic region and who will be able to reach any of the sites within an hour or execute a remote shutdown of the reactor.

In their study, the researchers go on to explain how and why exactly these features would have prevented core melt and the eventual nuclear disasters at each of the three notorious nuclear power stations.

In the case of the Three Mile Island accident: the most devastating accident in US commercial nuclear power plant history, considered to be the result of a rather typical combined failure, an alarm from E-SMD detectors would have triggered the emergency shutdown of the unit well before the event.

In December 2017, the ‘Chernobyl liquidators’ monument by Andrei Kovalchuk was ceremonially unveiled on Poklonnaya Hill in Moscow’s Victory Park to pay tribute to the people who took part in the clean-up operations after the explosion at the Chernobyl nuclear power plant on April 26, 1986.
Photo by Country of Rosatom.

In Chernobyl, where critical human errors are found to have led to the accident, an intervention from the ERT: a remotely controlled shutdown and perhaps the deployment of the military would have prevented the consequent catastrophe.

Extended core damage at the Fukushima Units 1 to 3 would have also been prevented thanks to the combination of emergency alerts and prompt action by the ERT.

The researchers also note that, in spite of the notoriety of the three nuclear disasters, there have been about 500 safely operated nuclear power plant units since the demonstration of the capability to control the fission reaction in 1942 and the connection of nuclear fission driven electricity generator to the electrical grid in 1954. On top of that, there have been a few thousand accident-free reactors used for purposes different from electricity production, including research, production and marine propulsion.

“The industry and/or the Government of responsible Countries where applicable, become the main players for the possible implementation of the ideas in this paper. A strategy is needed in this connection: academia and research institutes willing to be engaged into practical applications of the nuclear technology should become actors,” the scientists write in conclusion.


## #

Original source:

D’Auria F, Debrecin N, Glaeser H (2019) The technological challenge for current generation nuclear reactors. Nuclear Energy and Technology 5(3): 183-199. https://doi.org/10.3897/nucet.5.38117

Bulgaria’s publishers and scholars gathered to discuss the move of the national scientific journals to the global scene

The event was co-organised by Pensoft and the Bulgarian National Science Fund (BNSF) at the Ministry of Education and Science

Over one hundred representatives of Bulgarian scholarly journals and academic institutions attended a seminar, organised by the scientific publisher and technology provider Pensoft and the Bulgarian National Science Fund (BNSF) at the Ministry of Education and Science of Bulgaria. The meeting, themed “The Bulgarian scholarly journals in the global scientific environment – advancements in the publishing model, technological modernisation, indexing, dissemination and promotion,” took place in Sofia in September. 

In his speech, Prof. George Vaysilov, Director of the BNSF, highlighted the crucial role of scholarly publishing reformation in Bulgaria. He also answered various questions concerning the funding available to scientific journals.

“These events are useful for the Bulgarian scientific journals and the Bulgarian National Science Fund” will continue to participate in their organisation,” he said.

Prof. George Vaysilov gave a welcome speech before answering various questions from the attendees.
Photo by Pensoft.

In their talks, the Pensoft team addressed key topics and innovations related to journal publishing, management, dissemination and marketing in the digital era. They also showcased how these challenges are approached at the journals published via the scholarly Pensoft-developed ARPHA Platform. 

Main topics in the discussions were „Plan S”, the ongoing initiative for a global transition to immediate Open Access (Gold Open Access); exclusive digitisation; interoperability, findability and accessibility to online research items and data; traditional and alternative metrics for tracking journal impact; as well as the specifics about journal indexing. 


“Technological modernisation of the publishing process in an Open Access and Open Science environment” was the theme of Prof. Lyubomir Penev’s presentation. 
Photo by Pensoft.

Prof. Lyubomir Penev, Director and founder of Pensoft and ARPHA, added:

“In our own lifetimes, we’ve been the witnesses of a tremendous technological breakthrough on a global level. Not only does academia need not be left behind – its place is at the very forefront of such a revolution. This is exactly what we intend to do with ARPHA: to provide an all-rounded platform coupled with all the associated services, in order to provide the technological backbone needed by historical, as well as recently launched journals to make a stand on the international scene. Having listened to the questions and concerns of the Bulgarian publishers, I am able to confirm that the situation is not that different to what we see everywhere: there is the evident understanding of the situation and desire for a change. What is necessary is only a bit of practical know-how.”

The revolution in scholarly publishing in recent years. A part of Prof. Lyubomir Penev’s presentation.
Photo by Pensoft.


As transparent as it gets! Five pricing plans & operating models from ARPHA available to OA academic journals

One size to fit them all? At ARPHA, we are well aware that it does not work like that in academia, let alone when it comes to accommodating individual scholarly journals from across the tremendously varied publishing landscape. 

This is why we have prepared five options to account for the specific aims and needs of ARPHA’s potential clients, while bearing in mind their resources and sustainability. 

In the spirit of transparency and openness, along with a comprehensive list of services that clarifies how each plan compares with the rest, we have provided the associated pricing ranges, where the total expenditure is easy to calculate, as it is based solely on the volume of published content. To support emerging publishers and prolific institutions, and express gratitude for their trust, we offer discounts for multiple journals joining ARPHA’s community.

Visit our website to see what services our LITE, BASIC, STANDARD, ADVANCED and PREMIUM plans provide and how much each of them would cost for your individual case.  

While Open Science initiatives, including OA2020 and Plan S, have clearly become the major talking points, academic institutions, societies and small-to-medium publishers from around the world are increasingly looking to chip in the growing community and make their own stand for science becoming truly efficient, responsible and inclusive by ensuring openness, transparency and FAIRness. But how do they do that when capped budgets, scarce human resources and lack of know-how in specific areas come into play? 

While one may be struggling with bringing together the right in-house expertise, another might be unable to keep track of the ‘top wanted’ integrations and services required for any state-of-the-art publication venue, and yet another might be encountering difficulties in communicating their otherwise ground-breaking published research to the public. In our experience, all of them are most likely experiencing difficulties with either the development of an advanced and user-friendly technological backbone or covering the associated costs.


ARPHA provides a highly automated, end-to-end publishing platform to ALL clients by default, which ensures that the research in their journals is just as easy to prepare and publish as it is to discover, access and reuse later on.

Here are the good news! ALL journals published on ARPHA Platform take advantage of our signature high-tech and easy-to-operate full-featured platform by default. What we mean, is that any journal benefits from an end-to-end, entirely online publishing solution, which takes care of the manuscripts all the way from submission and peer review to editing, publication, dissemination, indexing and archiving (see “The 5 Most Distinct Features of ARPHA), while the annual maintenance could easily cost as little as a few thousands euros.

ARPHA stands for much more than a publishing platform.
It also comprises an extensive collection of services brought together in order to attend next-to-all demands associated with scholarly publishing.

On top of ARPHA’s user- and collaboration-friendly platform that allows for authors, reviewers and editors to easily and conveniently manage and track the progress of manuscripts, thereby ensuring that no technological pitfalls stand in the way to rapid and efficient distribution of scientific knowledge, our platform is continuously expanding its suite of services and features. This is also where one can find the major differences between the five plans offered by ARPHA.

With so many services and functionalities at hand, it was not that difficult for us to come up with five thought-through alternatives, and still ensure that ALL clients of ARPHA have their journals’ content published in a Findable, Accessible, Interoperable and Reusable manner.

As you can notice, even the lowest-priced LITE Plan features a plenty of useful and advanced perks, including a one-stop API end-point for distribution to 30+ international databases, metadata export to 12+ machine-readable formats, article sharing and usage statistics tools.

Assignment of DOIs to individual images is one of the perks exclusive in ARPHA’s PREMIUM plan (see pictured, available in Alpine Entomology). 


At the other end of the spectrum, ARPHA’s PREMIUM Plan adds top-notch features, such as assignment of Digital Object Identifiers (DOIs) to individual images, which in turn allows for the delivery of real-time usage metrics for each one of those.

Extensive marketing and promotional support, including an unlimited dissemination of press releases via the major global science news release platform Eurekalert! (AAAS), is also available to PREMIUM clients. Thus, a journal’s authors will not have to worry about their groundbreaking discoveries failing to reach the global public (e.g. news story “Scientists discover new Chinese firefly species” on SKY News, covering one of the latest publications in ZooKeys journal, and the associated press release on Eurekalert!).

News story via SKY News.

***

Curious about how ARPHA could accommodate your journal(s)? 

Scroll down our pricing plans and operating models, and fill out the Get a Quote form. Shortly, we will be back in touch to discuss the best options for ARPHA to fit the specificity of your publishing project.

Field research in Turkmenistan’s highest mountain reveals high biological diversity

New open-access book presents a comprehensive report on the remarkable ecosystems of the Koytendag nature reserve

Location of Koytendag
Image by Atamyrat Veyisov

Situated in the extreme south-east of Turkmenistan: on the border with Uzbekistan and close to the border with Afghanistan, Koytendag presents one of the most distinct landscapes in Central Asia. Reaching elevations of up to 3,137 m, this is also the highest mountain in Turkmenistan.

Koytendag State Nature Reserve and its three Wildlife Sanctuaries: Hojapil, Garlyk and Hojaburjybelent, were established between 1986 and 1990 to protect and preserve the mountain ecosystem of the Koytendag region and maintain the ecological balance between the environment and increasing economic activities.

Since 2013, a series of scientific expeditions and assessments were coordinated and funded by the Royal Society for the Protection of Birds (RSPB) to pave the way for the protection and preservation of the unique landscape and rare wildlife the site is recognised for.

As a result, the efforts of the conducted field studies of multidisciplinary international research teams are brought together in a comprehensive report, which is now openly available as an Advanced Book from the scientific publisher and technology provider Pensoft, edited by Geoff Welch (RSPB) and Prof. Pavel Stoev (National National Museum of Natural History of Bulgaria and Pensoft). Soon, the book will also be available in Russian.

The book is split into eight sections focused on different areas within the study of biodiversity: Flora, Surface dwelling invertebrates, Cave fauna, Fish, Amphibians, Reptiles, Birds and Mammals. An additional chapter is dedicated to the hydrogeology of the site because of its key role in supporting both the cave fauna and the local communities.

Entrance to the newly discovered record-breaking underground lake at the Koytendag State Nature Reserve
Photo by Mikhail Pereladov

In the summary of the report, the authors make a list of the most significant findings made during the research. These include the discovery of a cave hosting the largest underground lake in the whole North Eurasia (4,400 m2) and a total of 48 species of higher plants that can only be found in Koytendag. In terms of Koytendag’s surface-dwelling fauna, the report lists a number of species new to science: a scorpion (most likely yet unnamed species currently recognised as a species complex) and a spider. Meanwhile, a total of seven previously unknown species were found underground, including the very first exclusively subterranean animal found in the country: the insect-like ‘marvellous’ dipluran named Turkmenocampa mirabilis, and a strongly adapted to the underground waters of a desert sinkhole Gammarus troglomorphus. Additionally, the annual monitoring, conducted since 1995 by the reserve staff, report an encouraging increase in the populations of the rare markhors and mouflons. An intact predator-prey community was also identified as a result of observations of numerous Eurasian lynxes and grey wolves, as well as prey species.

Entrance of the cave Kaptarhana, (Lebap Province, Eastern Turkmenistan), where scientists discovered the first ever exclusively subterranean dweller for the country in 2017 (find more here).
Photo by Aleksandr Degtyarev

Stephanie Ward, RSPB Central Asia Partner Development Officer, says:

“RSPB has been working in Turkmenistan under a Memorandum of Understanding with the Government since 2004. In that time we have had the privilege of working with a team of talented and dedicated national experts across the diverse and inspiring nature of this fascinating country. Our work in Koytendag has captured the attention and interest of many international scientists who hope that their contemporary biodiversity research will help to deepen the understanding and therefore ensure protection of the unique wonders of this mountain ecosystem. As a potential UNESCO World Heritage Site, we will continue to collaborate with the Turkmen people on the research and promotion of Koytendag State Nature Reserve.

Book editor and member of the research team Prof. Pavel Stoev adds:

“Koytendag Mountain is among the least explored and, simultaneously, one of the most biologically diverse regions in Central Asia. The rapid assessments of its flora and fauna revealed a high number of highly specialised species, all of which have undergone a long evolution to adapt to the harsh environments of the mountain. The establishment of Koytendag State Nature Reserve and the associated wildlife sanctuaries is a step in the right direction for the protection of this unique biota.”

The report, published in an openly accessible Advanced Book format, is available from
https://doi.org/10.3897/ab.e37858.

###

Original source:

Welch G, Stoev P (2019) A report of RSPB-supported scientific research at Koytendag State Nature Reserve, East Turkmenistan. Advanced Books. https://doi.org/10.3897/ab.e37858

Additional information:

This work was carried out under the Memorandum of Understanding between the Ministry of Agriculture and Environment Protection of Turkmenistan and the RSPB, within the Project on “Improvement of the status of birds and other biodiversity in Turkmenistan”.

About Koytendag State Nature Reserve:

Koytendag State Nature Reserve was established in 1986 to protect and preserve the mountain ecosystem of the Koytendag region and maintain the ecological balance between the environment and the increasing anthropogenic activities. Of particular importance was the protection of rare species, such as the markhor; important habitats, including pistachio and juniper forests; and the impressive dinosaur trackways at Hojapil.

Advanced Books publishing by Pensoft:

Launched by Pensoft and powered by the scholarly publishing platform ARPHA, the Advanced Books approach aims to issue new books or re-issue books previously only available in print or PDF. In the Advanced Books format, the publications are semantically enhanced and available in HTML and XML as well, in order to accelerate open access, data publication, mining, sharing and reuse. The Advanced books builds on the novel approaches developed by the Pensoft’s journals.

Pensoft welcomes Neotropical Biology & Conservation to its open-access journal portfolio

Eleven studies in the first issue demonstrate the modernized look & feel of the Brazil-born journal, as provided by the scholarly publishing platform ARPHA

Launched by the Brazilian university Unisinos (Universidade do Vale do Rio dos Sinos) in 2006, the open-access, peer-reviewed Neotropical Biology & Conservation moves to the journal family of scholarly publisher and technology provider Pensoft.

Neotropical Biology & Conservation welcomes research and review articles, short communications and commentaries on the biology and behaviour of organisms from the tropical ecoregions of the Americas and the entire South America. Special emphasis is given to papers that demonstrate the application of conservation principles for natural resource management and policy. Manuscripts can be published in Portuguese, as well as English, where an English-language abstract is mandatory.

The journal is published three times a year, with the first 2019 issue already available on the new website. New research papers, part of the second issue, will be out next Monday (15th July).

New website for Neotropical Biology & Conservation

Beyond Neotropical Biology & Conservation‘s new glossy and user-friendly appearance, the Pensoft-developed scholarly platform ARPHA provides its signature fast-track, end-to-end publishing system to the benefit of its users: authors, reviewers and editors alike. Thereby, each submitted manuscript is carried through the review, editing, publication, dissemination and archiving stages without leaving ARPHA’s collaboration-centred online environment. The articles are available in PDF and machine-readable XML formats, so that they are easy to discover, access, cite and reuse.

Editor-in-Chief of Neotropical Biology & Conservation Dr Ana Maria Leal-Zanchet, says:

“It’s an honour for the Editorial board of Neotropical Biology & Conservation that the journal becomes a member of the Pensoft/ARPHA team. This journal was born as Acta Biologica Leopoldensia, which was published by Unisinos between 1979 and 2005. Since 2006 Neotropical Biology & Conservation continued the tradition of this former journal, publishing articles from all around Brazil, and even enhancing its coverage to other parts of the Neotropics. In recent years, the scientific community that uses our journal as a venue to disseminate their research results has been continuously increasing. We maintain our commitment to disseminate scientific findings through open access and to continue pursuing a sustainable international growth. I am sure that the user-friendly ARPHA’s publishing system and the great support of the Pensoft team will please authors, reviewers and the Editorial board of the journal, enhancing the efficiency, quality and swiftness of publishing, as well as the international visibility of Neotropical Biology & Conservation.”

ARPHA’s and Pensoft’s founder and CEO Prof Lyubomir Penev says:

“I’m delighted to welcome Neotropical Biology & Conservation to the Pensoft/ARPHA family, where the journal not only feels at home amongst predominantly biodiversity-themed titles, but also comes to complement another two Brazil-born journals: Check List, which publishes biogeographical data, especially for the use of biodiversity conservation, and Zoologia: mostly focusing on systematics, evolution and taxonomy in the field of Zoology. With this kind of background and the constantly expanding high-tech functions of ARPHA, I’m certain that we are fully equipped to build on the image and success of Neotropical Biology & Conservation.”

What’s on in the first issue?

Amongst the 11 articles in the first issue of Neotropical Biology & Conservation, there is the study by Dr Lucas Porto (Federal University of Rio Grande do Sul) and Dr Ana Maria Rui (Universidade Federal de Pelotas), which observes Crab-eating and Pampas foxes in southern Brazil for a year to compare the diets and habitat uses of the two sympatric species. Curiously, the canids demonstrated a high overlap of their diets at all times, with the exception of autumn.

Another paper, authored by a research team from the Federal Institute of Education, Science and Technology of Goiano and the Federal University of Goiás, describes the frequency, occurrence status and activity period of the most common medium- and large-sized mammals living in the world’s most biodiverse savanna: Brazil’s Cerrado. Namely, subjects of the study were the Giant anteater, Nine-banded armadillo, South American tapir, Crab-eating fox and Lowland paca, where the largest species were found to have the greatest variation in time period of activity.

A collaborative work at the Federal University of PernambucoUniversity of Brasília and the Rural Federal University of Pernambuco, reports important observations of the unexpectedly diverse bat fauna in an urban environment located in the Atlantic Forest, northeastern Brazil. Between May 2006 and April 2007, the researchers captured 950 bats identified to 16 species and five families.

The first 2019 issue of Neotropical Biology and Conservation.

Follow Neotropical Biology & Conservation on Twitter and Facebook.

All ARPHA-hosted journals indexed in Transpose to support transparency in journal policies

All open-access, peer-reviewed academic titles of Pensoft‘s, as well as those using the white-label publishing solution provided by the scholarly publishing platform ARPHA, have their journal policy data fed into the Transpose database, in order to increase their discoverability and transparency.

Thanks to the recent integration with the community-sourced initiative Transpose, details about each journal’s approach to peer review, co-review and preprint publication can be easily accessed, navigated and compared through a user-friendly interface. Visitors can also query the data by journal title, publisher, ISSN or DOI, and apply several filters.

Having estimated that almost 1/3 of the top-cited journals across disciplines do not provide clearly basic information about their editorial policies, including whether they operate blind peer review or not, the team behind Transpose launched the forward-thinking community-sourced initiative with the aim to advance practices in academia and increase awareness and transparency amongst authors, editors and many other stakeholder groups. To highlight the essentiality of free and easy access to editorial policies for a wide range of actors, Transpose have published user testimonials on their website coming from various points of view, including early researchers, supervisors, project investigators, funders, publishing staff, and others.


Recent integration of the scholarly publishing platform ARPHA and Transpose results in the editorial policies of all ARPHA-hosted journals being fed into the associated database. Thus, various stakeholders from across the academic landscape are provided with an easy access to details about the peer review, co-review and preprint policies at each journal via a user-friendly interface.

Pensoft and ARPHA’s founder and CEO Prof. Lyubomir Penev says:

“Having been Open Science advocates from the very beginning, at Pensoft and ARPHA, we have always supported our clients and users in being as transparent as possible. Favourite examples are the open-science journal Research Ideas and Outcomes (RIO), welcoming continuously updatable publications from across the whole research cycle, and Rethinking Ecology, launched to voice innovative and even bold ideas for the purposes of taking swift actions towards the conservation of the environment. The former operates public pre- and post-publication peer review to support efficient collaboration in research, while the latter relies on double-blind peer reviews, in order to encourage researchers of various experience and background to share their inventive ideas in ecology. Obviously, journal policies are and should be crucial when it comes to picking a specific journal over another regardless of the perspective. This is why I am certain that joining Transpose is doing good for all ARPHA-hosted journals, as well as the academic community.”

ASAPbio‘s Executive Director and member of the team behind Transpose, Dr Jessica Polka adds:

“We’re thrilled to incorporate data from Pensoft into Transpose. Making policy information clear and easy to find ensures that authors and reviewers can work with journals that best align with their values — and that scholarly work can be fairly interpreted by everyone, including general readers.”

###

Additional information:

About Transpose:

Transpose is an initiative to build a database of journal policies. It focuses on three areas: open peer review, co-reviewing, and detailed pre-printing policies. It welcomes contributions from anyone, but seeks verification from journals and publishers. The goal of Transpose is to foster new practices while increasing awareness among authors, editors, and other stakeholders, and we seek to provide resources to assist journals in setting, sharing, and clarifying their policies.

Bulgarian Pharmaceutical Scientific Society’s journal moves to high-tech ARPHA platform

The established Pharmacia demonstrates a complete makeover in its new issue after signing with scientific publisher and technology provider Pensoft and its signature open-access platform

Launched by the Bulgarian Pharmaceutical Scientific Society in 1954, the open-access, peer-reviewed Pharmacia has been available online as full text since 2007. As of 2019, the journal moves to the fast-expanding portfolio of scholarly publisher and technology provider Pensoft. The journal’s 2019 inaugural issue and the first since the realisation of the new partnership is already live on the journal’s new website.

Homepage of Pharmacia‘s new website, https://pharmacia.pensoft.net

Thanks to the Pensoft’s signature open-access scholarly publishing platform ARPHA, Pharmacia demonstrates a complete makeover, including a modern and user-friendly interface in addition to a long list of high-tech perks, meant to ensure that published articles are easy to discover, access, cite and reuse by both humans and machines all over the world.

Furthermore, all users of the journal’s system: authors, editors and reviewers alike, are to greatly benefit of ARPHA’s integrated approach to the publication process. This means that once submitted each manuscript goes through the whole cycle: from review and copy/layout editing to publication, dissemination and archiving without leaving ARPHA’s collaboration-focused online environment.

One of the interesting features now available in Pharmacia is the article-level metrics available thanks to the partnership between ARPHA and the revolutionary discovery and analytics tools Dimensions and Altmetric. By searching through millions of research articles, grant applications, clinical trials, as well as policy documents, news stories, blogs and social media posts, they allow for each article’s references and citations in both the academic and the public sphere to be monitored in real time.

Continuing its tradition, the journal welcomes original research and review articles, preliminary and short communications (notes) on a wide range of topics within the pharmaceutical and related sciences. In addition, the journal also publishes conference reports, biographies and book reviews. Articles in Pharmacia are published in English and subjected to single-blind peer review.

Pharmacia‘s Editor-in-Chief Prof Plamen Peikov, comments:

“We have been looking forward to our collaboration with Pensoft and ARPHA, as it is certainly going to not only help modernise Pharmacia on the outside, but also make it more appealing to our authors and readers by building on the journal’s accessibility and global outreach. I believe that this nice step forward is already clearly evident in Pharmacia‘s latest issue.”

ARPHA’s and Pensoft’s founder and CEO Prof Lyubomir Penev says:

“I’m delighted to see this particular journal joining the Pensoft’s and ARPHA’s family,” says ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev. “With our strong background in scholarly publishing, technology development and open science practices, I am certain that we are able to provide the right venue for a high-quality and enterprising journal like Pharmacia.”

What’s on in the new issue?

The creeping cinquefoil – a perennial plant from the Northern hemisphere – has its status as a traditional medicine for treating diarrhoea, haemorrhoids and bleeding gums confirmed in a collaborative ethnobotanical study by researchers at the Bulgarian Academy of Sciences and the Medical University of Sofia (Bulgaria). Further, the team, led by Irena Mincheva, seek to explore the suggested use of the plant against mastitis: a relatively common disease and a major cause for milk reduction in both people and dairy cows.

Another paper, authored by Dr Illya Podolsky and Sergiy Shtrygol from the National University of Pharmacy in Ukraine, adds new information about “the pharmacological nature” of a molecule already known as a promising antidepressant with a unique spectrum of additional properties. By conducting an experiment in rats, using the preferred Morris water maze assessment method, the scientists study the effects of Atristamine on spatial memory and learning.

Pharmacia‘s latest issue is available on the new website. Available in HTML, XML and PDF formats, the articles are easy to find, access, mine, reuse and cite by both humans and computers. Check out the issue at: https://pharmacia.pensoft.net/issue/1757/.

###

Pharmacia is indexed byScopusAltmetricBiotechnobaseCAplusSM/Chemical AbstractsCNKICrossRefDimensionsEBSCOhostEmbase, ExtraMED, Google ScholarJ-GateMEDLINE/PubMedMendeleyMicrosoft AcademicNaviga (Softweco)OpenAIREPascalReadCubeToxcenterUnpaywall.

About the Bulgarian Pharmaceutical Scientific Society:

The Bulgarian Pharmaceutical Scientific Society was registered in 2003 with the aim to organise national and international science forums, support education and publish academic literature. Its main objectives are to organise and encourage pharmacological research and support collaboration between pharmacology professionals and related organisations on both national and global level.