Eye for Detail: Papers in Pensoft journals sport a new look

Readers at some of the journals published by Pensoft, who have downloaded/printed a publication or ordered a physical copy of a journal issue over the last few weeks, might be in for a surprise concerning the layout of the PDF format of the articles. 

Research papers published in ZooKeys demonstrating the former (left) and the current (right) article layout seen in the PDF format. 

Even though it’s been years since online publishing has become the norm in how we are consuming information – including scientific publications – we understand that academia is still very much fond of traditional, often paper-based, article layout format: the one you use when accessing a PDF file or a print copy, rather than directly scrolling down through the HTML version of the article. 

Even if today large orders of printed volumes from overseas are the exception, rather than the rule, we know we have readers of ours who regularly print manuscripts at home or savе them on their devices. Trends like this have already led to many journals first abandoning the physical- for digital-first, then transitioning to digital-only publication format.

Meanwhile, it is true that needs and demands have fundamentally changed in recent times. 

As we speak, readers are accessing PDF files from much higher-quality desktops, in order to skim through as much content as possible. 

In the meantime, authors are relying on greater-quality cameras to document their discoveries, while using advanced computational tools capable of generating and analysing extra layers of precise data. While producing more exhaustive research, however, it is also of key importance that their manuscripts are processed and published as rapidly as possible.

So, let’s run through the updates and give you our reasoning for their added value to readers and authors.

Revised opening page

One of the major changes is the one to the format of the first page. By leaving some blank space on the left, we found a dedicated place for important article metadata, i.e. academic editor, date of manuscript submission / acceptance / publication, citation details and licence. As a result, we “cleaned up” the upper part of the page, so that it can better highlight the authors and their affiliations. 

Bottom line: The new layout provides a better structure to the opening page to let readers find key article metadata at a glance. 

Expand as much – or as little – as comfortable

As you might know, journals published by Pensoft have been coming in different formats and sizes. Now, we have introduced the standard A4 page size, where the text is laid in a single column that has been slightly indented to the right, as seen above. Whenever a figure or a table is used in a manuscript, however, it is expanded onto the whole width of the page.

Before giving our reasons why, let’s see what were the specific problems that we address.

Case study 1

Some of our signature journals, including ZooKeys, PhytoKeys and MycoKeys, have become quite recognisable with their smaller-than-average B5 format, widely appreciated by people who would often be seen carrying around a copy during a conference or an international flight.

However, in recent times, authors began to embrace good practices in research like open sharing of data and code, which resulted in larger and more complex tables. Similarly, their pocket-sized cameras would capture much higher-resolution photos capable of revealing otherwise minute morphological characters. Smaller page size would also mean that often there would be pages between an in-text reference of a figure or a table and the visual itself.

So, here we faced an obvious question: shall we deprive their readers from all those detailed insights into the published studies?

Case study 2

Meanwhile, other journals, such as Herpetozoa, Zoosystematics and Evolution and Deutsche Entomologische Zeitschrift, had long been operating in A4 size, thereby providing their readers with a full view of the figures in their publications. 

Yet, the A4 format brought up another issue: the lines were too long for the eye comfort of their readers. 

What they did was organise their pages into two-column format. While this sounds like a good and quite obvious decision, the format – best known from print newspapers – is pretty inconvenient when accessed digitally. Since the readers would like to zoom in on the PDF page or simply access the article on mobile, they will need to scroll up and down several times per page. 

In addition, the production of a two-column text is technologically more challenging, which results in extra production time.

Bottom line: The new layout allows journals to not sacrifice image quality for text readability and vice versa. As a bonus, authors enjoy faster publication for their papers.

Simplified font

If you have a closer look at the PDF file, you would notice that print-ready papers have also switched to a more simplistic – yet easier to the eye – font. Again, the update corresponds to today’s digital-native user behaviour, where readers often access PDF files from devices of various resolutions and skim through the text, as opposed to studying its content in detail.

In fact, the change is hardly new, since the same font has long been utilised for the webpages (HTML format) of the publications across all journals.

Bottom line: The slightly rounder and simplified font prompts readability, thereby allowing for faster and increased consumption of content. 

What’s the catch? How about characters and APCs?

While we have been receiving a lot of positive feedback from editors, authors and readers, there has been a concern that the updates would increase the publication charges, wherever these are estimated based on page numbers.

Having calculated the lines and characters in the new layout format, we would like to assure you that there is no increase in the numbers of characters or words between the former and current layout formats. In fact, due to the additional number of lines fitting in an A4 page as opposed to B5, authors might be even up for a deal.

________

For news from & about ARPHA and the journals using the platform, you can follow us on Twitter and Linkedin.

Pensoft among the first 27 publishers to share prices & services via the Journal Comparison Service by Plan S

In support of transparency and openness in scholarly publishing and academia, the scientific publisher and technology provider Pensoft joined the Journal Comparison Service (JCS) initiative by cOAlition S, an alliance of national funders and charitable bodies working to increase the volume of free-to-read research. 

As a result, all journals published by Pensoft – each using the publisher’s self-developed ARPHA Platform – provide extensive and transparent information about their costs and services in line with the Plan S principles.

The JCS was launched to aid libraries and library consortia – the ones negotiating and participating in Open Access agreements with publishers – by providing them with everything they need to know in order to determine whether the prices charged by a certain journal are fair and corresponding to the quality of the service. 

According to cOAlition S, an increasing number of libraries and library consortia from Europe, Africa, North America, and Australia have registered with the JCS over the past year since the launch of the portal in September 2021.

While access to the JCS is only open to librarians, individual researchers may also make use of the data provided by the participating publishers and their journals. 

This is possible through an integration with the Journal Checker Tool, where researchers can simply enter the name of the journal of interest, their funder and affiliation (if applicable) to check whether the scholarly outlet complies with the Open Access policy of the author’s funder. A full list of all academic titles that provide data to the JCS is also publicly available. By being on the list means a journal and its publisher do not only support cOAlition S, but they also demonstrate that they stand for openness and transparency in scholarly publishing.

“We are delighted that Pensoft, along with a number of other publishers, have shared their price and service data through the Journal Comparison Service. Not only are such publishers demonstrating their commitment to open business models and cultures but are also helping to build understanding and trust within the research community.”

said Robert Kiley, Head of Strategy at cOAlition S. 

***

Journals using the ARPHA Platform as a white-label publishing solution to publish their journal(s) under their own label should note that it is the responsibility of the journal owner publisher to submit journal data to the JCS. This means that it is only journals published on ARPHA and associated with Pensoft that have been automatically featured in the JCS.

However, the ARPHA team is ready to assist journals using the platform’s white-label publishing to provide details to cOAlition S and the JCS.

***

About cOAlition S:

On 4 September 2018, a group of national research funding organisations, with the support of the European Commission and the European Research Council (ERC), announced the launch of cOAlition S, an initiative to make full and immediate Open Access to research publications a reality. It is built around Plan S, which consists of one target and 10 principles. Read more on the cOAlition S website.

About Plan S:

Plan S is an initiative for Open Access publishing that was launched in September 2018. The plan is supported by cOAlition S, an international consortium of research funding and performing organisations. Plan S requires that, from 2021, scientific publications that result from research funded by public grants must be published in compliant Open Access journals or platforms. Read more on the cOAlition S website.

New ARPHA features strengthen journal communities

Long past are the days where a journal’s role was to merely provide a means to getting a piece of research work out of a drawer and into the wide world. Today, a modern journal with demonstrable online presence and a distinct ‘character’ may as well be seen as a social network in its own right, which brings together a community of frequent readers, authors, reviewers and dedicated editors.

At ARPHA, we believe that this is the time to support and give voice to these very special communities by getting to know each other and sharing and celebrating their achievements. After all, it’s strong and active communities that foster collaboration, recognition and real-life impact.

Revamped journal newsletters

Newsletter from PhytoKeys emailed to journal users subscribed for article alerts.

Journal readers subscribe to New Article alerts to stay updated about new research papers as they are published in a trusted scholarly outlet. Yet, having subscribed to notifications from a particular title – or a selection of similar titles – means that those users – typically authors, editors or active researchers in the field – might also be interested in learning about the journal’s latest Scopus CitesCore or Impact Factor; article collections calling for contributions; or new additions to the editorial board. All of these could be extremely useful to consider before submitting a paper, applying for the editorial board or simply updating a “to-read” list.

Thanks to the visually appealing look and clickable section tabs, newsletter subscribers can easily navigate through the email and explore its content at a glance.

Find instructions about how to update your profile and set up your email alerts in the ARPHA Manual.

‘Post your news’ button

Prof Christopher John Topping introduced himself with a meet-and-greet at the time of joining the newly renovated Food and Ecological Systems Modelling Journal as a co-Editor-in-Chief.

As wholesome communication is a two-way experience, we decided to support journals published on ARPHA in setting up the stage for their users to voice their activities. By adopting the Post your news button, many of the journals introduced a simple form accessible to registered users, where they can update the community about basically everything that’s relevant to the journal and its scope. 

Particularly, the feature is useful to introduce new members of the editorial board; seek out collaborators; promote an upcoming scientific event; or celebrate the far-reaching impact and recognition of one’s research work published in the journal. Once approved by a moderator, the news item is featured in the journal’s designated News section on its website’s homepage and its newsletter.

Find instructions about how to submit a news item and how submitted news items are moderated.

Editors’ Choice badges

Every quarter, the Editors-in-Chief at Vegetation Classification and Survey (VCS) recognise one paper as an “Editor’s Choice”, and an yearly award is presented at the end of each year.

A simple, yet effective way to celebrate the impact of a particular publication is having the journal’s editors pinpoint the paper as an Editor’s choice. While many journals have traditionally been awarding articles and their authors with similar recognitions, it is not often that anyone is aware of those outside of the editorial board and the awardees themselves.

As a practical solution, we introduced customisable badges that can be added next to an article’s title, and allow a journal’s editors to highlight the best contributions.

Find instructions for editors on how to add badges to published articles.

***

Follow ARPHA Platform on Twitter and LinkedIn.

Contributions to Entomology is the fourth Senckenberg journal to move to ARPHA Platform

By signing with the scholarly publisher and technology provider Pensoft, Contributions to Entomology – a journal by the Senckenberg German Entomological Institute – becomes the fourth Senckenberg academic title to transfer to the growing portfolio of the open-access scholarly publishing platform ARPHA

Earlier this year, the publisher came to similar agreements with Arthropod Systematics & Phylogeny, Vertebrate Zoology and Geologica Saxonica, which have already been relaunched on ARPHA under the branding of the Senckenberg Natural History Collections Dresden.

Likewise, Contributions to Entomology is to continue as a journal published exclusively by Senckenberg, thanks to the white-label publishing solution designed by ARPHA to preserve the identity of historical journals. Still, the journal is to utilise the whole package of signature services provided by the platform, including ARPHA’s fast-track, end-to-end publishing system, which benefits readers, authors, reviewers and editors alike.

With ARPHA – the scholarly publishing platform initially developed by Pensoft to cater for the needs for academic journals – each submitted manuscript is carried through the review, editing, publication, dissemination and archiving stages without leaving the platform’s collaboration-centred online environment.

Thanks to ARPHA’s highly automated workflow, once published, the content is indexed and archived instantaneously and its underlying data exported to the relevant specialised databases. Simultaneously, a suite of various metrics is enabled to facilitate tracking the usage of articles and sub-article elements – like figures and tables – in real time .

The articles themselves are openly available in PDF, machine-readable JATS XML formats, and semantically enriched HTML for better reader experience. Thus, the journal’s content is made as easy to discover, access, reuse and cite as possible.

Founded back in 1951 under the title “Beiträge zur Entomologie”, Contribution to Entomology publishes original contributions on insect systematics, taxonomy, phylogeny, zoogeography, faunistics, ecology, applied entomology, entomological bibliography, and the history of entomology. The journal operates a Diamond Open Access policy, where neither access to content, nor publication incurs charges.

“We are delighted to welcome this particular journal on ARPHA Platform. While we’re publishing academic titles from across the sciences, Pensoft and ARPHA are still best known for their biodiversity- and ecology-themed journals and domain-specific innovations. This is why we are honoured to be able to share our experience and approach with Senckenberg and Contributions to Entomology,”

says Prof. Dr Lyubomir Penev, founder and CEO at ARPHA and Pensoft.

***

About Senckenberg:

Senckenberg, Research Institutes and Natural History Museums, conduct research in bio- and geoscience. Major research fields are biodiversity and ecosystem research and the research on the entire Earth-Human-Earth system. Senckenberg headquarters are located in Frankfurt am Main, but research on marine, terrestrial and climate systems is also housed at additional nine locations throughout Germany: in Dresden, Gelnhausen, Gorlitz, Hamburg, Messel, Muncheberg, Tubingen, Weimar and Wilhelmshaven. Senckenberg employs about 1,000 people, including 300 scientists. Senckenberg scientists are active in projects worldwide, most of which are international collaborations with universities and other research institutions. Senckenberg hosts biological and geological research collections with more than 35 million series.

Moscow State Linguistic University’s journal Languages and Modalities launched on ARPHA Platform

Languages and Modalities, a new peer-reviewed international journal published by the Moscow State Linguistic University, now uses a high-end publishing infrastructure after moving to the technologically advanced ARPHA Platform and signing with scholarly publisher and technology provider Pensoft.

The journal encourages the exchange of ideas in the study of meaning at the intersection of various languages and modes and channels of communication. It explores the ways in which we create, express, or negotiate meaning using different languages and modes or channels of communication, how we borrow and adapt words and their meanings between languages, how meanings differ in different languages, and how they travel and change across languages and modalities.

Languages and Modalities publishes articles on the cross-lingual aspects of semantics, comparative and contrastive semantics, various types of bilingualism, and on the multimodality of human interaction. It especially encourages submissions that are interdisciplinary in content and methodology. The cutting-edge approaches and methods of cross-lingual and multimodal linguistic research it disseminates help improve our understanding of natural interaction across languages and contribute to more efficient communication. Providing an open-access platform for international audiences of scholars in cross-lingual and multimodal semantics, the journal contributes to building up the capacity of cross-disciplinary exchange of ideas worldwide.

After moving to Pensoft’s scholarly publishing platform ARPHA, and with a new user-friendly website, Languages and Modalities now takes full advantage of ARPHA’s signature fast-track, end-to-end publishing system, which significantly improves user experience for authors, reviewers and editors alike. The collaboration-focused platform supports manuscripts in all steps of the publishing process – submission, peer review, editing, publication, dissemination and archiving, all within its online environment. To the benefit of readers, published articles are then made available in PDF, machine-readable JATS XML formats, and semantically enriched HTML, which makes them much easier to discover, access, cite and reuse.

“ARPHA has proved to be the best solution for both commencing and experienced editorial teams, as it creates a very friendly environment from the point of view of publishing processes, as well as personal interaction,” commented the journal’s editor in chief, Olga Iriskhanova.

The journal’s first issue, focused on multimodal studies of co-speech gestures as well as sign languages, is already available open access on its new website. It is dedicated to the memory of Dominique Boutet (1966–2020), a French researcher who introduced a breakthrough method of analyzing co-speech gestures and sign language signs based on modern technology from the digital arts and a multidisciplinary approach to gesture annotation. His kinesiological approach offers a unique methodological system that changes a researcher’s perspective from an external (visual) to an internal (physiological) one, allowing for a more objective and digital-friendly analysis.

Other highlights in this pilot issue, which contains works are inspired, built on, or related to Boutet’s framework for multimodal kinesiological analysis of interlocutors’ bodily movements observed in various languages, include an investigation of the multimodal expression of irony in interaction and a discussion of the use of the question-answer pattern for relativisation across signed languages. 

With this new partnership, Pensoft steps into the field of linguistics and communication studies. The scholarly publisher, best known for its wide range of biodiversity journals, is constantly looking to expand its thematic scope – just recently it added computer studies to its portfolio after announcing a deal with the Journal of Universal Computer Science.

All articles published in Pensoft journals at your fingertips with the Researcher app

Following a recent integration with the novel, social network-style research discovery app Researcher, the scholarly publishing platform ARPHA has taken yet another step to ensure scholarly publications from across its open-access, peer-reviewed journal portfolio are as easy to find and read as possible. Now, research papers published in all Pensoft’s, as well as all other journals hosted on ARPHA, can reach the 1.8 million current users of Researcher directly on their screens.

Similarly to the world’s best known and used social media networks: Twitter, LinkedIn and Facebook, Researcher allows its users, scientists and academics, to follow their favourite scholarly journals and topics, in order to receive their content in a personalised newsfeed format, either on their phones or computers. Thus, they can stay up to date with the latest research in their scientific fields by simply scrolling down: much like what they are already used to in their everyday life outside academia. 

Additionally, Researcher lets users bookmark papers to go back to later on and even invite friends to join the platform. Furthermore, the users can also synchronise their accounts with their ORCID iDs, in order to load their own papers on their profiles on Researcher. 

The Researcher app fetches new publications from all indexed journals several times a day, thus ensuring that a user’s newsfeed is updated in almost real time. Now, the ARPHA-hosted journals have joined the 17,000 academic outlets from across the sciences already sharing their publications on the app.

“At Pensoft, we are perfectly aware that good and open science practices go far beyond cost-free access to research articles. In reality, Open Science is also about easier findability and reusability, that is the probability one stumbles across a particular research publication, and consequently, cite and build on the findings in his/her own studies. By indexing our journals with Researcher, we’re further facilitating the discoverability of their content to the benefit of the authors who trust us with their work,”

says ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev.

“We share ARPHA’s belief that Open Science means more than just free access – it means giving scholarly and scientific content the best chance to get in front the right reader at the right time. Our mission is to make sure that scientists and researchers never miss vital research. This partnership will ensure that distribution to our users across the world is built into the ARPHA platform – boosting discoverability and smoothing the path to impact,”

adds Olly Cooper, CEO of Researcher.

Follow ARPHA on Twitter and LinkedIn.

ARPHA Platform’s content integrated into ScienceOpen to take advantage of novel streams of science communication

The research discovery platform ScienceOpen and Pensoft Publishers have entered into a strategic collaboration with the aim of strengthening the companies’ identities as the leaders of innovative content dissemination. The new cooperation will focus on the unified indexation, the integration of Pensoft’s ARPHA Platform content into ScienceOpen and the utilization of novel streams of scientific communication for the published materials.

Pensoft is an independent academic publishing company, well known worldwide for bringing novelty through its cutting-edge publishing tools and for its commitment to open access practices. In 2013, Pensoft launched the first ever, end-to-end, XML-based, authoring, reviewing and publishing workflow, now upgraded to the ARPHA Publishing Platform. As of today, ARPHA hosts over 50 open access, peer-reviewed scholarly journals: the whole Pensoft portfolio in addition to titles owned by learned societies, university presses and research institutions.

As part of the strategic collaboration, all Pensoft content and journals hosted on ARPHA are indexed in the ScienceOpen’s research and discovery environment, which puts them into thematic context of over 60 million articles and books. In addition, thousands of articles across more than 20 journals were integrated into a “Pensoft Biodiversity” Collection. Combined this way, the content benefits from the special infrastructure of ScienceOpen Collections, which supports thematic groups of articles and books equipped with a unique landing page, a built-in search engine and an overview of the featured content. The Collections can be reviewed, recommended and shared by users, which facilitates academic debate and increases the discoverability of the research.

The Pensoft Biodiversity collection on ScienceOpen.

“It is certainly great news and a much-anticipated milestone for Pensoft, ARPHA and our long-year partners and supporters from ScienceOpen to have brought our collaboration to a new level by indexing the whole ARPHA-hosted content at ScienceOpen,” comments Pensoft’s and ARPHA’s CEO and founder Prof. Lyubomir Penev. “Most of all, the integration between ARPHA and ScienceOpen at an infrastructural level means that we will be able to offer this incredible service and increased visibility to newcoming journals right away. On the other hand, by streaming fresh and valuable publicly accessible content to the ScienceOpen database, these journals will be further adding to the growth of science in the open.”

Stephanie Dawson, CEO of ScienceOpen says, “I am particularly excited to add new high-quality, open access biodiversity content from Pensoft Publishers to the ScienceOpen discovery environment as we have a very active community of researchers on ScienceOpen creating and sharing Collections in this field. We are looking forward to working with Pensoft’s innovative journals to support their open science goals.”

The collaboration reflects not only the commitment of both Pensoft and ScienceOpen to new methods of knowledge dissemination, but also the joint mission to champion open science through innovation. The two companies will cooperate at a strategic level in order to increase the international outreach of their content and services, and to make them even more accessible to the broad community.

###

About ScienceOpen:

From promotional collections to Open Access hosting and full publishing packages, ScienceOpen provides next-generation services to academic publishers embedded in an interactive discovery platform. ScienceOpen was founded in 2013 in Berlin and Boston by Alexander Grossmann and Tibor Tscheke to accelerate research communication.