New features in ARPHA to aid journal editors in day-to-day activities and long-term strategic decisions

Recently, at Pensoft, we were delighted to report the positive trends and progress the majority of our journals demonstrated in terms of their citability for 2019. Moreover, this comes as an encouraging pattern where the results have been following the positive progression we’ve been enjoying in recent years. 

Below you can learn about our latest features that address the availability of transparent and dynamic information about the journal’s performance from various perspectives: from authorship and readership to trends in peer review time, and user activity.

Even more statistics to provide key insights into the journal’s performance

Our system already provides plenty of statistics, in order to inform the editors about:

  • manuscript submissions at any moment and their status;
  • publications and submissions for any period of interest; 
  • publications by article type for a period of choice; 
  • international representation based on lead author’s country for a period of choice;
  • article views for a period of choice.

Now, in the Statistics tab, the editors can find even more data, including the average time the manuscripts submitted over a defined period have spent at each stage (e.g. reviewer or editorial decision). Also, the editors have access to a record of all online mentions from across the Internet (data available from our partners at Altmetric), including traditional and new media, blogs, Wikipedia, policy documents and many others. 

See how to access all available statistics on an ARPHA-host journal here.

… all of this brought straight to your inbox with our:

Biannual journal performance report

For further convenience for our managing editors, we will be emailing a journal performance report twice a year, starting in July 2020. In this report, the editors will be receiving graphics on the journal’s performance for the current year and how the results fare against the previous one. The statistics provided include:

  • current submissions and their status;
  • submissions, publications and rejections by quarter;
  • acceptance rate;
  • turnaround time at different processing stages;
  • average review invitations, declines and review rounds per article;
  • top 10 countries represented by lead authors;
  • article views by format (PDF, HTML and XML) and in total;
  • number of online article mentions (data available from Altmetric);
  • Journal Impact Factor and CiteScore trends over the last five years.

Extended annual journal performance report

Citations trends available from Dimensions are reported on an annual basis for journals using the Standard and Premium packages provided by ARPHA Platform.

An extended annual report will be emailed to those who have opted for the ARPHA’s Standard and Premium package of reporting services. There, the editors will also have access to further and more exhaustive insights into the citability, outreach, readership and scholarly impact of their journals and their content. For journals that benefit from the Premium package of reporting services, we will be providing reviews and analyses meant to support the future strategy and progress of their journal.


*See all Journal performance reporting services provided by ARPHA Platform.

Statistics on reviewers’ and editors’ workload and activities

We know that it is the exception rather than the rule that a subject editor is certain about whom out of the lists of names in the system’s database will be most likely to provide a peer review at his request, especially when the task is due time. This is why before the editor selects a particular reviewer, he/she will be able to see the number of tasks (if any) the user is currently working on, in order to find out their current availability. In addition, the subject editor will be able to see how many reviews the user has provided so far, as well as how many times he/she has been invited to do so in the past.

Likewise, the same functionality is available for managing editors when they look to assign a manuscript to a subject editor.     

Review ratings

To further assist subject editors in their choice of appropriate reviewer, and also motivate reviewers, we have also implemented a 5-star rating system, where upon editorial decision on the acceptance/rejection of a manuscript, a subject editor is able to rate each of the provided reviews. The average result for a particular user will be visible in the system for the next subject editor who considers to assign him/her as a reviewer.

See how to rate a review here.

Keeping user expertise up to date

It’s fully understandable that users seldom think of the personal information visible on their accounts once they’ve completed their registration, as they don’t normally need to go back to it afterwards. However, their expertise details determine whether their name will show up in the lists of suggested reviewers and/or subject editors whenever an editor considers an assignment to the manuscript he/she is managing.

Here’s why we’ve introduced a regular reminder for users to review and, where necessary, update their expertise on their ARPHA account. This system message will come up once a year upon login and will straight away offer users a text box, where they can update their saved expertise. By means of free text, they will also be able to narrow it down even further.

As a result, not only are users not going to be bothered by irrelevant invitations – such as those received on the basis of their saved expertise being too broad, thereby saving time to the editorial team, but will also ensure that manuscripts will be indeed handed into the right hands for the sake of quality science.


Subscribe to our blog’s newsletter and follow us on Twitter (@ARPHAPlatform and @Pensoft) to keep yourself posted about the next features and updates coming to ARPHA!

Bulgaria’s National Cardiac Society pioneers ARPHA’s top-to-bottom bilingual publishing

The first 2020 issue of the society’s bilingual journal is already online on a brand new and user-friendly website

( 🇧🇬 Прочетете на български тук)

This month, ARPHA Platform welcomed the fourth medical academic journal to its portfolio: Bulgarian Cardiology („Българска кардиология”), the official publication venue of the Bulgarian National Cardiac Society since 1995. The Society is a member of the European Society of Cardiology

With its first 2020 issue, Bulgarian Cardiology pioneers the Bulgarian-English bilingual publishing solution from ARPHA, the open-access scholarly publishing platform, developed by the publisher and technology provider Pensoft. Thanks to this, authors will be able to publish their papers either in Bulgarian, or in Bulgarian and English. In the latter case, the article will be displayed in both languages side by side, as exemplified in the paper “Novel approaches to treat resistant hypertension” by Dr Alexandra Cherneva (Acibadem City Clinic – Cardiovascular center, Bulgaria) and Prof Ivo Petrov (Sofia University and Acibadem City Clinic – Cardiovascular center, Bulgaria).

“Novel approaches to treat resistant hypertension”, a research paper by Dr Alexandra Cherneva and Prof Ivo Petrov, published in the latest issue of Bulgarian Cardiology, available in both Bulgarian and English
(DOI: 10.3897/bgcardio.26.e52712)

For non-Bulgarian speaking authors, who submit their manuscript in English, the journal provides translation to Bulgarian, so that the published article is also available in both languages. In the latest issue, this is exemplified by the Editorial piece “Atrial fibrillation: Importance of real world data from regional registries. A focus on the BALKAN-AF registry”, authored by the international team of Dr Monika Kozieł, Prof Gregory Y. H. Lip and Dr Tatjana S. Potpara.

Even though bilingual Russian-English publishing was first introduced by ARPHA in late 2019 to coincide with the move of the Lomonosov Moscow State University’s journal Population and Economics to the platform, this time around, it is not mandatory for authors to translate their manuscript in English. On the occasion that the authors deem their work relevant exclusively for the medical researchers and practitioners on a national level, they are welcome to only submit in Bulgarian. However, they will still need to provide the paper’s metadata, including the abstract, in English, so that their findings remain findable and accessible to foreign users, in line with the best Open Science practices.

Having already acquired its own glossy and user-friendly website provided by ARPHA, Bulgarian Cardiology also takes advantage of the platform’s signature fast-track, end-to-end publishing system, which is to benefit all journal users: authors, reviewers and editors alike. In addition, the published content enjoys automated export of data to aggregators, as well as web-service integrations with major global indexing and archiving databases.

The first issue of Bulgarian Cardiology was published in 1995 to provide a scholarly outlet for the Bulgarian Society of Cardiology. Ever since then, it has been serving as an essential forum to bring together the cardiology community in the country. Its aim is to publish both the academic achievements of the Bulgarian medical experts and the key practical guidelines of the European Society of Cardiology.  

Bulgarian Cardiology accepts for publication research and review articles, clinical cases, editorials, letters to the Editor, European Society of Cardiology guidelines, announcements from the Bulgarian Society of Cardiology and materials presented at their meetings, and others. 

“It’s a pleasure to all of us at ARPHA to welcome the Bulgarian Society of Cardiology’s journal. It’s a fantastic win-win situation for both parties: while we managed to customise and provide the necessary services the Society asked us for, they offered us the opportunity to further push our capabilities and know-how, in order to launch our first top-to-bottom bilingual publishing solution,”

says Prof. Lyubomir Penev, founder and CEO at ARPHA and Pensoft.

The journal will continue to be published also in print with four issues a year.

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Visit the journal’s website at https://journal.bgcardio.org/.

Pensoft signs with Senckenberg Nature Research Society to publish three journals on ARPHA

Recently, the scholarly publisher and technology provider Pensoft signed with one of the largest natural research associations in Germany: the Senckenberg Nature Research Society, to publish three journals: Arthropod Systematics & PhylogenyVertebrate Zoology and Geologica Saxonica on behalf of the Senckenberg Natural History Collections Dresden, one of the oldest natural-science museums in the world.

Expected to move to the Pensoft-developed technologically advanced scholarly publishing platform ARPHA later in 2020, the three academic outlets will not only acquire their own glossy and user-friendly websites, but will also take advantage from ARPHA’s signature fast-track, end-to-end publishing system, which is to benefit all journal users: authors, reviewers and editors alike. In addition, the journals will use all unique services offered by ARPHA, such as data publishing, linked data tables, semantic markup and enhancements, automated export of sub-article elements and data to aggregators, web-service integrations with more than 40 world-class indexing and archiving databases, sub-article-level usage metrics, and more.

Thereby, each submitted manuscript will be carried through the review, editing, publication, dissemination and archiving stages without leaving ARPHA’s collaboration-centred online environment. The articles are to be available in PDF, machine-readable JATS XML formats, and semantically enriched HTML for better reader experience to ensure they are easy to discover, access, cite and reuse.

Arthropod Systematics & Phylogeny succeeded the historical Entomologische Abhandlungen, formerly published by the Museum of Zoology, Dresden, in 2006. Its scope covers the taxonomy, morphology, anatomy, phylogeny, historical biogeography and palaeontology of arthropod taxa.

Similarly, Vertebrate Zoology was preceded by Zoologische Abhandlungen, also formerly published by the Museum of Zoology, Dresden. It deals with research on the taxonomy, morphology, anatomy, phylogeny, historical biogeography and palaeontology of vertebrates.

Meanwhile, Geologica Saxonica – Journal of Central European Geology, began its life in distant 1876, when it was founded under the name Mitteilungen aus dem Koniglichen Mineralogisch-Geologischen und Prahistorischen Museum by German geologist Hanns Bruno Geinitz, renowned for his work on the Carboniferous and Cretaceous rocks and fossils of Saxony.

“At Pensoft, we take pride in our latest partnership with the world-renowned natural history association of Senckenberg. “We are certain that our collaboration will bring many advantages to the research community: readers, authors and their affiliates alike,”

comments Pensoft and ARPHA’s founder and CEO Prof. Lyubomir Penev.

Senckenberg is not the first prestigious German research institution to enter into an agreement with Pensoft. Since 2014, the Natural History Museum Berlin has trusted the publisher with its own historical titles in the Biology domain: Deutsche Entomologische Zeitschrift and Zoosystematics and Evolution. In 2017, Evolutionary Systematics, another prominent journal with a legacy in the field of Zoology by the University of Hamburg followed suit. Zitteliana, a historical scholarly journal covering all fields of paleontology and geobiology by the State Natural History Collection of Bavaria (SNSB) is to also join the journal portfolio of Pensoft and ARPHA Platform in the next months.

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About Senckenberg:

Senckenberg, Research Institutes and Natural History Museums, conduct research in bio- and geoscience. Major research fields are biodiversity and ecosystem research and the research on the entire Earth-Human-Earth system. Senckenberg headquarters are located in Frankfurt am Main, but research on marine, terrestrial and climate systems is also housed at additional nine locations throughout Germany: in Dresden, Gelnhausen, Gorlitz, Hamburg, Messel, Muncheberg, Tubingen, Weimar and Wilhelmshaven. Senckenberg employs about 1,000 people, including 300 scientists. Senckenberg scientists are active in projects worldwide, most of which are international collaborations with universities and other research institutions. Senckenberg hosts biological and geological research collections with more than 35 million series.

Acta Biologica Sibirica signs with Pensoft and moves to ARPHA

Acta Biologica Sibirica is a peer-reviewed open-access journal on the biodiversity of Siberia and the adjacent lands, published by Altai State University in collaboration with Pensoft Publishers

Acta Biologica Sibirica is an open-access, peer-reviewed journal on the biodiversity of Siberia and the adjacent lands by Altai State University. Since 2015, it has been publishing original research in the field of experimental and field biology.

Starting from 2020, Acta Biologica Sibirica moves to the full-featured technologically advanced platform ARPHA and will be published in collaboration with the scholarly publisher and technology provider Pensoft.

Pensoft’s original publishing system ARPHA allows Acta Biologica Sibirica to publish original research papers, reviews, short communications, letters and discussion papers, book reviews and memorial articles. The scholarly platform was designed to facilitate authors in the manuscript writing, submission and review process as end-to-end experience, including publication of the data and multimedia content in the form, suitable for both enhanced high-tech human and machine discoverability of the scholarly outputs.

Acta Biologica Sibirica accepts for publication papers in taxonomy, phylogeny, biogeography, faunistics, floristics, biological systematics, nature conservation and protected areas. In the fields of faunistics and floristics there are several types of articles, available for submission: floral and faunal lists on any region of the world, faunal and floral discoveries (e.g. species newly recorded in a particular region, additions to previously published inventories), papers on methodology of faunal and floral studies.

«Our basic task is to turn our journal into a high-quality world-class publication. Without the help of modern publishers, this is almost impossible. The choice of the publisher was perfectly logical – the reputation of Pensoft Publishers and its founder, the famous Bulgarian zoologist Lubomir Penev, is impeccable. To stand in one cohort with powerful publications with a long history is an honor for us. High standards of editing and reviewing manuscripts, the absolute level of originality and scientific novelty – these are the criteria on which we will rely»,

comments the editor-in-chief of the journal, Professor of Altai University Roman Yakovlev.

«At Pensoft, we are delighted to initiate this wonderful partnership with yet another renowned research institution in Russia, namely Altai State University. With our long-year experience in zoological and biodiversity research publishing and dissemination, I am certain that the journal has found a fitting place in the family of Pensoft and ARPHA»,

comments Prof. Lyubomir Penev, CEO and founder of Pensoft and ARPHA.

The first papers of 2020 are already available online on the new website of Acta Biologica Sibirica.

Within the pioneering papers published in the renewed journal, there is a research article about the first result of DNA-studies on the Central Asiatic owlet moths in the genus Euchalcia. The studied specimens were collected in Kyrgyzstan and Kazakhstan during the expeditions of the Russian Entomological Society in 2017-2019. When comparing a specific mitochondrial gene (cytochrome C oxidase subunit I or COI) between various species, the scientists revealed that the difference amongst European Euchalcia species is smaller than the one amongst high-mountainous Central Asiatic species.

Another study records the first occurrence of the moorland clouded yellow in Altai Region. The butterfly was found to share a mitochondrial barcode with some specimens from mountain populations from the Alps and the Czech Republic.

Colias palaeno, male, vicinity of Ozerki village, Talmenskiy district, Altai region, Russia
Credit: Nazar A. Shapoval
License: CC-BY 4.0
Colias palaeno, male, vicinity of Ozerki village, Talmenskiy district, Altai region, Russia
Credit: Nazar A. Shapoval
License: CC-BY 4.0

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Follow Acta Biologica Sibirica on Twitter and Facebook.

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Additional information

About Altai State University:

Altai State University is one of the leading Russian classical higher education institutions established in 1973. It is a major educational, research and cultural center located in the Asian part of the country, integrated into the international academic community, training the intellectual elite and conducting high-impact research.

The unique geographical position of Altai region, located in the center of Asia predestinates the University’s mission – to appear as an international research and educational center that integrates, develops and spreads the modern Western, Russian and Asian knowledge in education, science and culture within the Asian region.

About ARPHA:

ARPHA is the first end-to-end, narrative- and data-integrated publishing solution that supports the full life cycle of a manuscript, from authoring to reviewing, publishing and dissemination. ARPHA provides accomplished and streamlined production workflows that can be customized according to the journal’s needs. The platform enables a variety of publishing models through a number of options for branding, production and revenue models to choose from.

About Pensoft:

Pensoft is an independent academic publishing company, well-known worldwide for its innovations in the field of semantic publishing, as well as for its cutting-edge publishing tools and workflows. In 2013, Pensoft launched the first ever end to end XML-based authoring, reviewing and publishing workflow, as demonstrated by the Pensoft Writing Tool (PWT) and the Biodiversity Data Journal (BDJ), now upgraded to the ARPHA Publishing Platform. Flagship titles include: Research Ideas and Outcomes (RIO), One Ecosystem, ZooKeys, Biodiversity Data Journal, PhytoKeys, MycoKeys and many more.

Contacts: 

Prof. Lyubomir Penev, founder and CEO at ARPHA and Pensoft
Email: penev@pensoft.net

Prof. Alex Matsyura, Editor-in-Chief of Acta Biologica Sibirica
Email: amatsyura@gmail.com 

Prof. Roman Yakovlev, Editor-in-Chief of Acta Biologica Sibirica
Email: yakovlev_asu@mail.ru


Official EASE journal European Science Editing goes diamond OA with ARPHA

Starting from 2020, European Science Editing (ESE), the official journal of the European Association of Science Editors (EASE), has been relaunched as a fully Open Access journal with all content freely available and published as soon as accepted, on a new journal website hosted on ARPHA Platform.

This move is part of a strategic relaunch of the journal to provide greater focus on research and expert commentary that will inform and support editors working in the scholarly environment. The relaunch comes after several months of planning by a small working group of EASE Council members and ESE editors. Much of the non-research content previously published in the journal will now be published in the newly-created member magazine, the EASE Digest; for example, News notes, The editor’s bookshelf, Resources, and interviews.

The journal is being relaunched with a new editorial board, but retaining the same Chief Editor, Ksenija Bazdaric, managing editor Dado Cakalo and associate editor associate editors Hrvoje Jakovac, Tom Lang and Joan Marsh. An introductory editorial published in the journal explains the changes.

Introductory editorial by ESE’s Chief Editor, Ksenija Bazdaric. Openly available from https://doi.org/10.3897/ese.2020.e50566.

The new editorial board comprises distinguished members from all over the world: Eva Baranyiova (Czech Republic), Lisa Colledge (UK), Moira Hudson (UK), Olga Kirillova (Russia), Zafer Kocak (Turkey), Rachael Lammey (UK), Vladimir S Lazarev (Belarus), John Loadman (Australia), Herve Maisonneuve (France), Ana Marusic (Croatia), Arjan Polderman (The Netherlands), Maria del Carmen Ruiz Alcocer (Mexico), Karen Shashok (Spain), Cem Uzun (Turkey), and Quan Hoang Vuong (Vietnam).

Ever dedicated to be a source of peer-reviewed information on all aspects of scholarly editing and publishing (i.e. research integrity, peer review, scientometrics, open science, predatory publishing, statistics), writing, translation and ethics, ESE welcomes editorials, original research articles, reviews, viewpoints and correspondence items.

ESE has moved to its new website, provided by the open-access scholarly publishing platform ARPHA (developed by scientific publisher and technology provider Pensoft), for all new articles, although the archive content will remain on the old website. This new website provides better delivery of the journal content and will help to make the journal easier to discover.

“I am happy to be working with the ARPHA team and that ESE has moved to a completely new platform which will raise the profile of editorial research and topics,”

Ksenija Bazdaric, ESE’s Chief Editor.

“At EASE we are delighted to be working with ARPHA and Pensoft to publish the journal in its new format. There has been considerable work invested in relaunching the journal with a new focus so that we can raise the profile of research about editing and the value that editors provide in the scholarly environment. An important part of the relaunch was ensuring greater visibility of the journal content and we are confident that ARPHA can help us achieve this,”

Pippa Smart, President, EASE.

“It could only make us proud at ARPHA that such a pillar in the world of scholarly communication has chosen our publishing platform to make the crucial step towards Open Access. I am certain that by opening up and digitalising its content right away, EASE will greatly facilitate and expedite the improvement of quality and integrity of science on the global scene,”

ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev. “

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Follow European Science Editing on Twitter.

Viticulture Data Journal: Non-conventional papers foster Open Science & sustainability

Non-conventional, yet pivotal research results: data, models, methods, software, data analytics pipelines and visualisation methods, related to the field of viticulture, find a place in a newly launched, open-access and peer-reviewed Viticulture Data Journal (VDJ). The journal went live with the publication of an introductory editorial and a data paper.

The publishing venue is one of the fruits borne during the collaboration between scholarly publisher and technology provider Pensoft, its self-developed ARPHA Platform and the EU project AGINFRA+, whose mission is to provide a sustainable channel and data infrastructure for the use of cooperating, but not fully connected user communities working within the agricultural and food sciences. 

The novel journal brings together a wide range of topics related to the field of viticulture: from genetic research, food safety of viticultural products to climate change adaptation of grapevine varieties through grape specific research. Amongst these are:

  • Phenotyping and genotyping
  • Vine growth and development
  • Vine ecophysiology
  • Berry yield and composition
  • Genetic resources and breeding
  • Vine adaptation to climate change, abiotic and biotic stress
  • Vine propagation
  • Rootstock and clonal evaluation
  • Effects of field practices (pruning, fertilization etc.) on vine growth and quality
  • Sustainable viticulture and environmental impact
  • Ampelography
  • Plant pathology, diseases and pests of grapevine
  • Microbiology and microbiological risk assessment
  • Food safety related to table grapes, raisins, wine, etc.

With the help of the ARPHA Platform’s signature writing tool, authors are able to use a set of pre-defined, yet flexible manuscript templates: Data Paper, Methods, Emerging Techniques, Applied Study, Software Description, R Package and Commentary. Furthermore, thanks to the advanced collaborative virtual environment provided by the tool, authors, but also reviewers, editors and other invited contributors enjoy the convenience of working within the same consolidated online file all the way from the authoring and peer review stages to copy editing and publication.

“The Viticulture Data Journal was created to respond to the major technological and sociological changes that have influenced the entire process of scholarly communication towards Open Science,”

explain the editors.

“The act of scientific publishing is actually the moment when the long effort of researchers comes to light and can be assessed and used by other researchers and the wider public. Therefore, it is little wonder that the main arena of transition from Open Access to Open Science was actually the field of academic publishing,”

they add.

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The first research publication made available in VDJ is a data paper by the research team from Agricultural University of Athens: Dr Katerina Biniari, Ioannis Daskalakis, Despoina Bouza and Dr Maritina Stavrakaki. In their study, they assess and compare both the qualitative and quantitative characters of the grape cultivars ‘Mavrodafni’ and ‘Renio’, grown in different regions of the Protected Designation of Origin Mavrodafni Patras (Greece). The associated dataset, containing the mechanical properties, the polyphenolic content and the antioxidant capacity of skin extracts and must of berries of the two cultivars, is available to download as supplementary material from the article.  

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During the AGINFRA+ project, ARPHA has been extended to be used from the AGINFRA+ Virtual Research Environment (VRE), which would allow the authors to use the VRE as an additional gate to the AWT and the journal, as well as to benefit from the integration of AWT with several other services offered by the AGINFRA+ platform. The AGINFRA+ platform has been designed as a Gateway providing online access through a one-stop endpoint to services, aiming at the integration of the traditional narrative of research articles with their underlying data, software code and workflows.

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Viticulture Data Journal is indexed by Altmetric, CrossRef, Dimensions, EBSCOhost, Google Scholar, Mendeley, Microsoft Academic, Naviga (Suweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Ulrichsweb™, Unpaywall; and archived at CLOCKSS and Zenodo

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Follow Viticulture Data Journal on Twitter and Facebook.

Food Modelling Journal: New open-access venue provides a platform for food scientists

An introductory editorial and an article of a unique publication type are already made available in the next-generation journal

The open-access Food Modelling Journal (FMJ) was launched by the AGINFRA+ community and Pensoft with the aim to encourage food science specialists, agronomists and computer scientists to come together and work on assuring and improving food supply, quality and safety in our globalised and rapidly changing world.

The Food Modelling Journal will be focusing on the publication of information objects and digital resources in the food science field, related (but not limited) to: food safety, food quality, food control, food defence and food design, documenting experimental or observational data and mathematical models.

By providing a platform and tools for describing scientific records and crediting for dedicated models, data, data analytics workflows and software, FMJ fosters the overall reproducibility and reusability of research.

FMJ also aims to shed light on what we refer to as research objects – data, software scripts, visualisation routines or models. Usually, they would stay undervalued, underused and uncredited, despite their importance for the scientific progress.

The focus and scope of the journal are supported by a number of specific key features:

  • Quality but not quantity
  • Cross-disciplinary approach
  • Open data and software code policy
  • Rapid turnaround time
  • Advanced open access and machine-readability.

It should be noted that the Open Science movement and the barrier-free access to research, is at the heart of the FMJ project.

To support its authors, the AGINFRA+ community, Pensoft and Food Modelling Journal have provided them access to the ARPHA Writing Tool, where researchers are able to work together with their co-authors, colleagues and peers on manuscripts from the drafting stage to publication.

A FSKX model run using the executable paper feature available in Food Modelling Journal.

A particularly appealing feature, meant to promote reproducibility, collaboration and openness in science, is the executable papers, where users can reproduce research findings using the published model and running it either with default or new parameters. By clicking an “Execute” button within the body of the article, users are taken to an external virtual environment where they will be able to execute the computation. By ‘encapsulating’ all the details needed to perform the action within the paper, this feature ensures that the published findings will remain testifiable in the future.

“While the long-lasting tradition in science used to focus on crediting researchers’ work through conventional research articles and especially by counting their citations, many exciting, useful and often invaluable products of the research cycle, such as data, software scripts, visualisation routines or models (usually called “research objects”) normally stay undervalued, underused and uncredited, despite their importance for scientific progress,” note the editorial board in the introductory editorial.

“The consequences of this neglect of the initial and intermediate steps of the research cycle in favour of the research articles or research books are obvious: scientists often repeat efforts done by others instead of using these as a stepping stone for further analyses and generating new knowledge, let alone the impossible or restricted reproducibility and reusability of research results,” they add.

The first paper of a unique publication type: FSKX (Food Safety Knowledge), is already publicly accessible in the journal. Classified as an early research outcome, the article presents a new generic model for assessing the risk of salmonellosis associated with the consumption of table eggs. To ensure the reusability of the model, the research team of Virginie Desvignes (ANSES – French Food Safety Agency) have made it available in the Food Safety Knowledge Markup Language (FSK-ML) format alongside the executable model script, visualisation script and simulation settings.

FSK-ML is an open information exchange format that is based on harmonised terms, metadata and controlled vocabulary to harmonise annotations of risk assessment models and that was significantly improved and extended during the AGINFRA+ project.

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Follow Food Modelling Journal on Twitter and Facebook.

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Food Modelling Journal is indexed by BASE, CNKI, CrossRef, Dimensions, Google Scholar, J-Gate, Mendeley, Microsoft Academic, Naviga (Softweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Transpose, Ulrichsweb™ and Unpaywall; and archived at CLOCKSS, Zenodo and Portico.

Seven journals moving to ARPHA in early 2020 showcase the versatility of the publishing platform

A full-featured, open access publishing platform for journals, books and data, which comes with an extensive list of services and features – both automated and human-provided – to adapt to the individual needs of any client journal. But how does that translate into practice? 

The latest scholarly titles to join the ranks of ARPHA might just provide a perfect example of the capabilities of the platform to accommodate the specificity of scholarly journal across sciences, audiences, geographies and languages.

Amsterdam University Press strengthens partnership with ARPHA by launching two brand new journals

Journal of European Landscapes (JEL) and Heritage, Memory and Conflict Journal (HMC) add up to the partnership between ARPHA and Amsterdam University Press (AUP), which started in early 2018 with the transfer of the only Dutch-language open-access journal focussing on accountancy, business economics and related areas: Accountancy and Business Economics, or Maandblad voor Accountancy en Bedrijfseconomi (MAB).

Homepage of Amsterdam University’s journal Accountancy and Business Economics (Maandblad voor Accountancy en Bedrijfseconomi), using the white-label publishing solution of ARPHA Platform.

Not only was MAB the first journal on the platform that publishes articles exclusively in a language other than English, but also became an impressive precedent with its nearly 100-year content that got successfully dusted off and fitted into the user-friendly digital environment of today. All papers ever issued in MAB since its launch in 1923, were re-published, so that each could be assigned with a DOI; have its metadata registered on CrossRef; and its article content fully searchable within the PDF copy.

All three make use of ARPHA’s white-label publishing solution, which allows for AUP to carry its recognisable logo through a unified banner across the websites of the journals. Unlike MAB, however, JEL and HMC are to have their articles published exclusively in English to further promote their international scope and focus.

Heritage, Memory and Conflict Journal (HMC)

Homepage of the new Heritage, Memory and Conflict Journal published by Amsterdam University Press via ARPHA Platform.

Heritage, Memory and Conflict Journal is a brand new journal launched to trace back the remnants of the past – be it physical or anecdotal – back to their roots in the days of old. How do memory sites and discourses operate as vehicles at local, national and transnational levels and what indeed is the ‘cargo’ they carry? This is the type of questions authors from across disciplines – academic, artistic and industrial – will be trying to answer when preparing their manuscripts for HMC

Journal of European Landscapes (JEL) 

Homepage of the new Journal of European Landscapes published by Amsterdam University Press via ARPHA Platform.

Similarly, the second newly launched Journal of European Landscapes is to turn to history and cultural heritage, in order to understand the present use of the past when it comes to landscape. JEL’s founders point out that while Europe’s landscapes have so far enjoyed quite a lot of scientific attention, there isn’t a journal to address its indisputable and critical connection to heritage, even though the latter is what connects historical research with modern planning and management.

Vegetation Classification and Survey (VCS)

Homepage of the new Vegetation Classification and Survey journal published by the International Association for Vegetation Science via ARPHA Platform.

Adding up to the landscape topic is the Vegetation Classification and Survey (VCS) journal. This is the latest outlet launched by the International Association for Vegetation Science (IAVS): a worldwide union of scientists and other aficionados of theory and practice concerning the study of vegetation. 

With its transfer to ARPHA, VCS fulfils the mission of the union to move to Open Access. Interestingly, the journal supports two permanent sections: Ecoinformatics and Phytosociological Nomenclature. There, authors can submit certain unique article types: Review and Synthesis and Short/Long Database Reports. 

Devoted to plant community ecology, VCS publishes original research that works toward the development of novel vegetation classifications, as well as applied studies that use such typologies. Particularly encouraged are methodological studies that design and compare tools for vegetation classification and mapping. 

Plant Sociology 

Homepage of the new Plant Sociology journal published by Società Italiana di Scienza della Vegetazionevia ARPHA Platform.

Another modern botany journal still awaiting its first issue since its transfer to ARPHA, is Plant Sociology, brought to life by the “Società Italiana di Scienza della Vegetazione” (SISV) with the aim to succeed the historical journals of the society: Fitosociologia (1990-2011) and Notiziario della Società Italiana di Fitosociologia (1964-1989).

The editorial management opted to have the journal co-published with Pensoft: the academic publisher and technology provider standing behind ARPHA. Thus, by default, the journal receives some extra perks as a result of Pensoft’s partnerships with leading innovators in the scholarly communication domain.  An excellent example would be the indexing and addition of each Plant Sociology article by the research discovery platform ScienceOpen in the “Pensoft Biodiversity” collection, following a recent strategic collaboration between the two Open Science champions.

With a wide scope covering vegetation studies from plant community to landscape level, Plant Sociology puts a special focus on topics such as plant sociology and vegetation survey for developing ecological models, as well as plant classification, monitoring, assessment, management and conservation, as long as the studies are based on rigorous and quantitative measures of physical and biological components.

Caucasiana

Adding up to the well-pronounced biodiversity theme in ARPHA’s and Pensoft’s journal portfolios, as well as the “Pensoft Biodiversity” collection on ScienceOpen, is the first Georgian journal to join the lines of the publishing platform. Caucasiana is to be co-published by the top biodiversity research centre in the region: Ilia State University in Tbilisi and Pensoft.

The scholarly outlet that we’ll soon see on ARPHA Platform is in fact a successor of an earlier journal launched by the Institute of Zoology of the Georgian Academy of Science that has been revamped top-to-bottom. Transformed into a technologically advanced publishing venue, Caucasiana’s task is to handle the growing research interest in the incredible, yet surprisingly overlooked animal, plant and fungal life of Caucasus and adjacent regions. 

Research published in Caucasiana will be well-positioned to bring this hotspot of biodiversity and endemism into focus for the global conservation movement.

The EASE Journal: European Science Editing (ESE)

The quarterly journal of the European Association of Science Editors (EASE): European Science Editing (ESE) is a key news source for all actors involved in scholarly publishing.

For the first time, ESE will open up its content to the public from day one of its publication, thanks to its move to ARPHA. While digital and print subscriptions used to be included as part of the association’s membership packages, other readers would have had to wait six months after print publication to receive free access.

Launched in 2003, ESE’s aim has been to keep editors posted about everything they need to know concerning scholarly communication. To do so, the journal publishes research articles, meeting reports, essays and viewpoints, as well as book and website reviews. Especially for members of the association, ESE takes care to highlight upcoming events and provide resources and publications, considered to be of their interest. 

Bulgarian Journal of Cardiology

In 2020, ARPHA will also welcome the third Bulgarian-born academic journal and the fourth covering the field of Medical Sciences to its open-access portfolio: the journal of Bulgaria’s National Cardiac Society, which is part of the European Society of Cardiology (ESC).

For the first time, the Bulgarian Journal of Cardiology will make use of the soon-to-be-released English-Bulgarian bilingual publishing solution from ARPHA. Similarly to the English-Russian approach to journal publishing, which was presented in Moscow in early December, ARPHA will allow for users of the Bulgarian Journal of Cardiology to not only publish papers in both English and Bulgarian, but also enjoy a top-to-bottom Bulgarian user interface.

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Learn more about ARPHA’s key features and achievements from 2019 in our yearly recap.

ARPHA Platform’s content integrated into ScienceOpen to take advantage of novel streams of science communication

The research discovery platform ScienceOpen and Pensoft Publishers have entered into a strategic collaboration with the aim of strengthening the companies’ identities as the leaders of innovative content dissemination. The new cooperation will focus on the unified indexation, the integration of Pensoft’s ARPHA Platform content into ScienceOpen and the utilization of novel streams of scientific communication for the published materials.

Pensoft is an independent academic publishing company, well known worldwide for bringing novelty through its cutting-edge publishing tools and for its commitment to open access practices. In 2013, Pensoft launched the first ever, end-to-end, XML-based, authoring, reviewing and publishing workflow, now upgraded to the ARPHA Publishing Platform. As of today, ARPHA hosts over 50 open access, peer-reviewed scholarly journals: the whole Pensoft portfolio in addition to titles owned by learned societies, university presses and research institutions.

As part of the strategic collaboration, all Pensoft content and journals hosted on ARPHA are indexed in the ScienceOpen’s research and discovery environment, which puts them into thematic context of over 60 million articles and books. In addition, thousands of articles across more than 20 journals were integrated into a “Pensoft Biodiversity” Collection. Combined this way, the content benefits from the special infrastructure of ScienceOpen Collections, which supports thematic groups of articles and books equipped with a unique landing page, a built-in search engine and an overview of the featured content. The Collections can be reviewed, recommended and shared by users, which facilitates academic debate and increases the discoverability of the research.

The Pensoft Biodiversity collection on ScienceOpen.

“It is certainly great news and a much-anticipated milestone for Pensoft, ARPHA and our long-year partners and supporters from ScienceOpen to have brought our collaboration to a new level by indexing the whole ARPHA-hosted content at ScienceOpen,” comments Pensoft’s and ARPHA’s CEO and founder Prof. Lyubomir Penev. “Most of all, the integration between ARPHA and ScienceOpen at an infrastructural level means that we will be able to offer this incredible service and increased visibility to newcoming journals right away. On the other hand, by streaming fresh and valuable publicly accessible content to the ScienceOpen database, these journals will be further adding to the growth of science in the open.”

Stephanie Dawson, CEO of ScienceOpen says, “I am particularly excited to add new high-quality, open access biodiversity content from Pensoft Publishers to the ScienceOpen discovery environment as we have a very active community of researchers on ScienceOpen creating and sharing Collections in this field. We are looking forward to working with Pensoft’s innovative journals to support their open science goals.”

The collaboration reflects not only the commitment of both Pensoft and ScienceOpen to new methods of knowledge dissemination, but also the joint mission to champion open science through innovation. The two companies will cooperate at a strategic level in order to increase the international outreach of their content and services, and to make them even more accessible to the broad community.

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About ScienceOpen:

From promotional collections to Open Access hosting and full publishing packages, ScienceOpen provides next-generation services to academic publishers embedded in an interactive discovery platform. ScienceOpen was founded in 2013 in Berlin and Boston by Alexander Grossmann and Tibor Tscheke to accelerate research communication.

Bulgaria’s publishers and scholars gathered to discuss the move of the national scientific journals to the global scene

The event was co-organised by Pensoft and the Bulgarian National Science Fund (BNSF) at the Ministry of Education and Science

Over one hundred representatives of Bulgarian scholarly journals and academic institutions attended a seminar, organised by the scientific publisher and technology provider Pensoft and the Bulgarian National Science Fund (BNSF) at the Ministry of Education and Science of Bulgaria. The meeting, themed “The Bulgarian scholarly journals in the global scientific environment – advancements in the publishing model, technological modernisation, indexing, dissemination and promotion,” took place in Sofia in September. 

In his speech, Prof. George Vaysilov, Director of the BNSF, highlighted the crucial role of scholarly publishing reformation in Bulgaria. He also answered various questions concerning the funding available to scientific journals.

“These events are useful for the Bulgarian scientific journals and the Bulgarian National Science Fund” will continue to participate in their organisation,” he said.

Prof. George Vaysilov gave a welcome speech before answering various questions from the attendees.
Photo by Pensoft.

In their talks, the Pensoft team addressed key topics and innovations related to journal publishing, management, dissemination and marketing in the digital era. They also showcased how these challenges are approached at the journals published via the scholarly Pensoft-developed ARPHA Platform. 

Main topics in the discussions were „Plan S”, the ongoing initiative for a global transition to immediate Open Access (Gold Open Access); exclusive digitisation; interoperability, findability and accessibility to online research items and data; traditional and alternative metrics for tracking journal impact; as well as the specifics about journal indexing. 


“Technological modernisation of the publishing process in an Open Access and Open Science environment” was the theme of Prof. Lyubomir Penev’s presentation. 
Photo by Pensoft.

Prof. Lyubomir Penev, Director and founder of Pensoft and ARPHA, added:

“In our own lifetimes, we’ve been the witnesses of a tremendous technological breakthrough on a global level. Not only does academia need not be left behind – its place is at the very forefront of such a revolution. This is exactly what we intend to do with ARPHA: to provide an all-rounded platform coupled with all the associated services, in order to provide the technological backbone needed by historical, as well as recently launched journals to make a stand on the international scene. Having listened to the questions and concerns of the Bulgarian publishers, I am able to confirm that the situation is not that different to what we see everywhere: there is the evident understanding of the situation and desire for a change. What is necessary is only a bit of practical know-how.”

The revolution in scholarly publishing in recent years. A part of Prof. Lyubomir Penev’s presentation.
Photo by Pensoft.