Making the most of conferences with modern publishing and indexing practices

Given scientific conferences present academics with the fantastic opportunity to meet up and discuss their latest work, as well as share their vision for the future of their field, it’s no wonder that, historically, the majority of ground-breaking science can easily be traced back to a particular event.

This said, don’t you think that we need to do everything within our powers to ensure the visibility, dissemination and long-term accessibility of research presented and linked to these wonderful drivers of scientific progress that conferences are? Similarly to the care conference organisers take to make sure the event runs smoothly and the attendants are happy with the programme and enjoy themselves, the organisational committee should also be thinking how to preserve all those promising pieces of research well after the event is over.

Here at Pensoft, an open-access scholarly publisher, founded by scientists, we’ve been contemplating for a while now how to encourage and support the community to efficiently open up the valuable outputs to researchers and readers well beyond the publication of abstracts in an abstract book of the conference. 

As a result, we came up with several simple, yet efficient publishing solutions for scientific conferences to collect and contextualise various research outputs either presented at or resulting from the event.

Bear in mind that with any solution, all publications enjoy the benefits seen in conventional research papers, such as:

  • Crossref registration and individual DOI to ensure preservation;
  • Publication in PDF, semantically enhanced HTML and data-minable XML formats to improve readability, accessibility and findability;
  • Indexing and archiving at multiple, industry leading databases to increase visibility;
  • PR and social media promotion to boost outreach to various audiences.

Collections of conference abstracts, posters and presentations

Conference (video) abstracts, posters and presentations are easily the first to fall victims of the ephemerality of an event, yet these are too often the stepping stones to major scientific discoveries. This is why a few years back we launched ARPHA Conference Abstracts (ACA), where conference organisers can open their own collection and provide the participants with submission, review and publication of their abstracts ahead of the conference.

Furthermore, these abstracts can be handled editorially in sub-collections, e.g. the convenors of symposia or working groups within a conference will take care of the abstracts submitted to them, thus spreading the editorial workload across larger teams of editors and organisers.

Not only will conference organisers spare themselves the worries about providing a special platform for abstracts submissions, but this will also facilitate presenting authors, who will be able to easily point to their contribution before, during or after their presentations. On the contrary, the abstracts are assigned with DOIs, published in human-readable PDF and HTML and machine-actionable JATS XML, permanently preserved on ARPHA and Zenodo, and easy to find, access and cite, just like a conventional research paper, providing authors with full credit for their work early on.

Further, with ACA, the conference abstracts can be enhanced into what we call “extended abstracts”, meaning they can also include data, images, videos and multimedia. After the conferences, we can add video recordings of the presentations or graphic files of posters, so that these are visualised on the page of each abstract.

For example, take a look at the conference abstract collection of the Vth International Congress on Biodiversity: “Taxonomy, Speciation and Euro-Mediterranean Biodiversity”.

Conference proceedings

About the time we launched ACA, we also created ARPHA Proceedings, in order to also find a place for full-text conference papers. Similarly, the platform supports dedicated collections, where conference attendants are invited to submit and publish dynamically articles under the imprint of the event.

Conference papers in ARPHA Proceedings can also include data, figures and citations, and can also be updated with video recordings, posters and presentations following the conference.

Check out an example by the VI International Forum on Teacher Education.

Article topical collections and special issues resulting from conferences

Naturally, papers resulting from a particular conference are contextually linked, so a one-stop place to discover topical studies sharing one and the same topic would be greatly appreciated by readers and future researchers. In turn, this would lead to better viewership and citability of the papers in the collection.

With our user-friendly, dedicated workflow for special issues and permanent topical article collections, we’ve made it easy for guest editors across our journals to pitch and manage article collections, in order to bring together valuable and related studies. Using such a collection under the theme of your conference in a suitable journal, you can invite your conference’s participants or, better yet, all scientists working within the field, to submit their work in a nice package of topical science. We’d be happy to assist you with the identification of the most suitable journal for your conference, authors and goals.

See an example from One Ecosystem and the collection “Mapping and assessment of ecosystem condition and ecosystem services across different scales and domains in Europe”, the result from the “Mapping and assessment of ecosystem services – Science in action” conference, held in 2017.

Bringing together traditional and non-conventional research outputs, (e.g. research ideas, grant proposals, conference materials or workshop reports) with RIO Journal’s article collections

Undoubtedly, valuable research outcomes come in many shapes and sizes well beyond research papers, conference abstracts, posters and proceedings. We are firm supporters that every research item, even early and interim outputs, could be of value to the scientist next in line within a particular study.

This is why we launched the award-winning journal Research Ideas and Outcomes (RIO), where your collections can include both conventional and non-traditional research outputs, such as research ideas, posters, workshop reports, forum papers, policy briefs, software and data management plans to name a few. Furthermore, in RIO, you can even link articles or preprints published elsewhere to your collection via their metadata. Similarly to other Pensoft journals, in RIO, you will have the full control to whom you are opening your collection for submissions, allowing you to either limit it to the outcomes coming from your conference or welcome submissions from other researchers as well.

A permanent topical collection in RIO Journal may include a diverse range of both traditional and unconventional research outputs, as well as links to publications from outside the journal (see What can I publish on the journal’s website). 

See the Brainhack 2016 Project Reports, whose aim is to collate reports from the 2016 Brainhack events. Also, check out the collection of the European Biodiversity Observation Network (EU BON) Project, providing a nice example for a wide range of publication types.

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Don’t hesitate to get in touch to discuss your own case and select the best option for your conference – we’ll be happy to hear from you!

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Overview: top new ARPHA features from 2020

As another year is drawing to a close, it’s time for us to evaluate what we’ve achieved to better our services, or, as we’d rather refer to those, our mutual collaboration with our client journals and publishers, as well as their users: editors, reviewers, authors and readers alike. 

Without a doubt, 2020 has been an extraordinary year that posed plenty of challenges at both personal and professional level to everyone, everywhere in the world. Having said that, at ARPHA, we’re proud that our perseverance and dedication to never let down those who have put their trust in us have pulled us through, while ensuring that we close the year with a positive outlook.

In 2020, we saw the move of a total of 14 international scientific journals to ARPHA Platform of diverse origin, background and scientific fields:

Some of them opted to use our white-label publishing solution, while others decided to sign up with Pensoft as a (co-)publisher. Browse the complete list of ARPHA-hosted journals on our website.

Naturally, we understand that each journal has its own needs and wants, in addition to its own short- and long-term plans and goals. This is why it is from day one that we assume responsibility to work closely together to ensure a personal, customer-centric approach at all times. One way to do this is by having our various services flexible and available as opt-in, mix-and-match features, so that journals can customise their own publishing solution.

Furthermore, based on our clients’ feedback, in addition to our in-house observations and know-how, we don’t cease to introduce new opportunities for journals to upgrade their functionality to the benefit of their own teams and users. 

Below you will find an overview of the top new features and services ARPHA introduced in 2020:

  • ARPHA Preprints
  • Dedicated editorial workflow for Special Issues and Topical article collections
  • Editor and reviewer application form
  • Journal performance statistics
  • Journal performance reports
  • Workload statistics for reviewers and subject editors
  • Review rating
  • Contributor roles for co-authors 
  • Easy update of user expertise
  • Integration with the research discovery app Researcher

ARPHA Preprints

In October, we officially launched ARPHA’s preprint platform, aptly named ARPHA Preprints. Frankly speaking, we’ve been planning for our own preprint platform for quite a while now, as we were determined to ensure the feature is ultimately convenient and beneficial to our journals and their authors. Undeniably, 2020 proved the perfect timing to see this idea ripe, as we’ve been witnessing a significant rise in preprints use and demand.

So, what’s it in ARPHA Preprints that stands out? 

Available to all ARPHA Platform-hosted journals as an opt-in and free of charge service, ARPHA Preprints provides authors with the opportunity to post a preprint at the mere ‘cost’ of several clicks while submitting their article manuscript.

Submission of preprints workflow at participating ARPHA-hosted journals

By doing so, their pre-review manuscripts appear on ARPHA Preprints in a matter of one to a few days’ time, subject to a quick screening performed at the journal’s editorial office, in order to verify the submission conforms with the journal’s scope and standards, and does not contain any unethical content or plagiarism. If the associated paper is published in the journal, a link between the article and preprint is provided to prompt the citation of the paper rather than the preprint. On the occasion that the article is rejected at the ARPHA-hosted journal, where it has been submitted, the preprint is disassociated from the journal. 

Read more about ARPHA Preprints on our blog.

Dedicated editorial workflow for Special Issues and Topical article collections

Following a series of meetings with the editorial boards of our client journals, where we discussed the next steps in their plans in terms of journal development, we came up with the decision that we need a dedicated workflow to facilitate guest editors, who wish to propose a special issue or a topical article collection. Naturally, this workflow had to work just as convenient for the journal’s managing editors and everyone further down the line. Similarly to the ARPHA Preprints integration, we made this feature available to all ARPHA-hosted journals as an opt-in, free of charge service.

Firstly, we provided a clear information note on the key specifics, advantages and requirements for each article collection type. These are now available on the websites of all participating journals, in addition to an easy to spot proposal form, located on the journal’s homepage, in order to ensure that guest editors won’t be dissuaded by any technicalities.

Manuscript handling workflow at special issues / article collections in ARPHA-hosted journals

Secondly, by implementing direct proposal forms delivered straight to the Editors-in-Chief’s inboxes and easily visible on the journal website, as well as our distinguished highly automated manuscript handling workflow, we ended up with a smooth process that avoids potential delays, misunderstandings and annoying issues for everyone.

Read more about ARPHA’s approach to article collections and special issues on our blog.

Editor and reviewer application form

Similarly, after receiving valuable feedback from our client’s editorial board members, we figured that we could provide an easier application for subject editors at ARPHA-hosted journals. 

At the request of a journal’s managing editor, we are ready to add a convenient Become an Editor button on the homepage of the journal that takes the applicant to an exhaustive, yet simple to fill-in form. Upon submission, the application is delivered straight to the Editor-in-Chief’s inbox providing him/her with all necessary information to make a decision and reply to the applicant. 

By opting to add the feature, journals can make a simple, yet efficient step towards expanding the journal’s editorial team, thus optimising and expediting the editorial process, and naturally improving user satisfaction and journal performance.

Journal performance statistics

As we’re talking about journal development and striving for progress and success, the logical question is: how do we know what needs to be improved, revised or built upon? As always in science, the answer is: we need data and insight.

While we have had plenty of statistics available to Editors-in-Chief and managing editors for years already, we recently introduced several extra ones to provide further insight into the journal’s performance and how the numbers fare against those of previous months, quartiles or years.

So far, the Editors-in-Chief and managing editors have had access to:

  • manuscript submissions at any moment and their status;
  • publications and submissions for any period of interest; 
  • publications by article type for a period of choice; 
  • international representation based on lead author’s country for a period of choice;
  • article views for a period of choice.

In 2020, we added statistics about turnaround times, so that the editors are aware of the average time submitted manuscripts spend at different stages (e.g. peer review or editorial decision). Also, they now have access to a record of all online mentions from across the Internet, including traditional and new media, blogs, Wikipedia, policy documents and many others, thanks to our partners at Altmetric.

Journal performance reports

Even though we already made all those data concerning a journal’s real-time performance readily available for Editors-in-Chief and managing editors, we knew we could do more. As open-research proponents, we are well aware that openness and free access is not quite the same as findability. So, we set up bi-annual reports to be delivered to the inboxes of Editors-in-Chief and managing editors as a convenient and regular reminder of the current progress of the journal compared to the last period. 

In those reports, we point to the most recent statistics, concerning:

  • current submissions and their status;
  • submissions, publications and rejections;
  • acceptance rate;
  • turnaround times;
  • average review invitations, declines and review rounds;
  • authors by country;
  • article views;
  • online article mentions;
  • Journal Impact Factor and CiteScore trends.

Furthermore, for journals using ARPHA’s Standard and Premium reporting services, we have prepared an extended report for the end of the calendar year, where they will find even more insights into the citability, outreach, readership and scholarly impact of their journals and their content. For Premium customers, the report will also feature a review and recommendations provided by ARPHA’s journal development team.

Workload for reviewers and subject editors

We know that prolonged peer review time presents a frustrating stumbling block for many otherwise renowned for their high standards and academic rigour journals. Striving to further optimise this process at ARPHA-hosted journals, we developed workload statistics and record of past activity for reviewers and subject editors, visible to the editor at the stage of assignment. Thus, the editor is able to give priority to users who aren’t busy with editorial/review assignments at the moment, and/or those who have a good record of past activity at the journal and/or similar journals on ARPHA Platform.

Review rating

Similarly, to further encourage diligence and speed in peer review at ARPHA-hosted journals, we offer our clients an optional feature where subject editors can evaluate submitted reviews using a 5-star rating system. As a result, the next subject editors will be able to see the average score of a reviewer before they assign him/her for the manuscript they’re handling.

Contributor roles for co-authors 

Determined to always give credit where credit is due, while promoting transparency in academia and scholarship, we enabled submitting authors to assign each co-author with a role, depending on his/her primary contribution to the preparation of the manuscript. Thus, once published, a paper will clearly indicate the author who has, for example, conceptualised the study, developed the utilised software or written the original draft. 

The options available in the drop-down menu follow CRediT (Contributor Roles Taxonomy): a high-level taxonomy, which includes 14 roles typically assumed by contributors to scholarly output.

Easy update of user expertise

As everything is (hopefully!) moving quickly in academia, we figured it’s time to take extra care after ensuring the users profiles in our systems are as relevant as possible. This is important, because ARPHA uses the expertise listed in a user’s profile to suggest reviewers and subject editors for each manuscript. So, in order to facilitate our editors and, ultimately, further expedite the peer review process at ARPHA-hosted journals, we’ve scheduled a few reminders throughout the year to prompt users to have a look at their profiles and update them, if necessary.

Integration with the research discovery app Researcher

Well aware of the fact that Open Science is way more than cost-free access to scientific and publicly funded knowledge, we understand that in the digital reality of today, the question is much more about findability and discoverability, i.e. the probability that you stumble across a particular research paper while browsing. This is why we’re continuously integrating our platform and the journals hosted on ARPHA with additional research discovery platforms used by scientists around the world to inform themselves about the latest findings in their fields of interest. 

So, we recently collaborated with Researcher: an innovative mobile and web application, currently used by 1.8 million people globally, which allows you to set up your own social media-style feed of research papers by following your favourite academic journals or research topics. Now, all articles published in Pensoft’s journals – as well as participating journals using ARPHA’s white-label publishing solution – are continuously fetched by the app and delivered to their right audiences.   

Read more about our integration with Researcher on our blog.

We are always looking forward to hearing from our clients about what they like or dislike in ARPHA, as well as their recommendations on what we could do better! You are welcome to contact us with your feedback and questions at: info@arphahub.com.

Follow @ARPHAPlatform on Twitter. 

Bulgaria’s National Cardiac Society pioneers ARPHA’s top-to-bottom bilingual publishing

The first 2020 issue of the society’s bilingual journal is already online on a brand new and user-friendly website

( ?? Прочетете на български тук)

This month, ARPHA Platform welcomed the fourth medical academic journal to its portfolio: Bulgarian Cardiology („Българска кардиология”), the official publication venue of the Bulgarian National Cardiac Society since 1995. The Society is a member of the European Society of Cardiology

With its first 2020 issue, Bulgarian Cardiology pioneers the Bulgarian-English bilingual publishing solution from ARPHA, the open-access scholarly publishing platform, developed by the publisher and technology provider Pensoft. Thanks to this, authors will be able to publish their papers either in Bulgarian, or in Bulgarian and English. In the latter case, the article will be displayed in both languages side by side, as exemplified in the paper “Novel approaches to treat resistant hypertension” by Dr Alexandra Cherneva (Acibadem City Clinic – Cardiovascular center, Bulgaria) and Prof Ivo Petrov (Sofia University and Acibadem City Clinic – Cardiovascular center, Bulgaria).

“Novel approaches to treat resistant hypertension”, a research paper by Dr Alexandra Cherneva and Prof Ivo Petrov, published in the latest issue of Bulgarian Cardiology, available in both Bulgarian and English
(DOI: 10.3897/bgcardio.26.e52712)

For non-Bulgarian speaking authors, who submit their manuscript in English, the journal provides translation to Bulgarian, so that the published article is also available in both languages. In the latest issue, this is exemplified by the Editorial piece “Atrial fibrillation: Importance of real world data from regional registries. A focus on the BALKAN-AF registry”, authored by the international team of Dr Monika Kozieł, Prof Gregory Y. H. Lip and Dr Tatjana S. Potpara.

Even though bilingual Russian-English publishing was first introduced by ARPHA in late 2019 to coincide with the move of the Lomonosov Moscow State University’s journal Population and Economics to the platform, this time around, it is not mandatory for authors to translate their manuscript in English. On the occasion that the authors deem their work relevant exclusively for the medical researchers and practitioners on a national level, they are welcome to only submit in Bulgarian. However, they will still need to provide the paper’s metadata, including the abstract, in English, so that their findings remain findable and accessible to foreign users, in line with the best Open Science practices.

Having already acquired its own glossy and user-friendly website provided by ARPHA, Bulgarian Cardiology also takes advantage of the platform’s signature fast-track, end-to-end publishing system, which is to benefit all journal users: authors, reviewers and editors alike. In addition, the published content enjoys automated export of data to aggregators, as well as web-service integrations with major global indexing and archiving databases.

The first issue of Bulgarian Cardiology was published in 1995 to provide a scholarly outlet for the Bulgarian Society of Cardiology. Ever since then, it has been serving as an essential forum to bring together the cardiology community in the country. Its aim is to publish both the academic achievements of the Bulgarian medical experts and the key practical guidelines of the European Society of Cardiology.  

Bulgarian Cardiology accepts for publication research and review articles, clinical cases, editorials, letters to the Editor, European Society of Cardiology guidelines, announcements from the Bulgarian Society of Cardiology and materials presented at their meetings, and others. 

“It’s a pleasure to all of us at ARPHA to welcome the Bulgarian Society of Cardiology’s journal. It’s a fantastic win-win situation for both parties: while we managed to customise and provide the necessary services the Society asked us for, they offered us the opportunity to further push our capabilities and know-how, in order to launch our first top-to-bottom bilingual publishing solution,”

says Prof. Lyubomir Penev, founder and CEO at ARPHA and Pensoft.

The journal will continue to be published also in print with four issues a year.

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Visit the journal’s website at https://journal.bgcardio.org/.

Pensoft signs with Senckenberg Nature Research Society to publish three journals on ARPHA

Recently, the scholarly publisher and technology provider Pensoft signed with one of the largest natural research associations in Germany: the Senckenberg Nature Research Society, to publish three journals: Arthropod Systematics & PhylogenyVertebrate Zoology and Geologica Saxonica on behalf of the Senckenberg Natural History Collections Dresden, one of the oldest natural-science museums in the world.

Expected to move to the Pensoft-developed technologically advanced scholarly publishing platform ARPHA later in 2020, the three academic outlets will not only acquire their own glossy and user-friendly websites, but will also take advantage from ARPHA’s signature fast-track, end-to-end publishing system, which is to benefit all journal users: authors, reviewers and editors alike. In addition, the journals will use all unique services offered by ARPHA, such as data publishing, linked data tables, semantic markup and enhancements, automated export of sub-article elements and data to aggregators, web-service integrations with more than 40 world-class indexing and archiving databases, sub-article-level usage metrics, and more.

Thereby, each submitted manuscript will be carried through the review, editing, publication, dissemination and archiving stages without leaving ARPHA’s collaboration-centred online environment. The articles are to be available in PDF, machine-readable JATS XML formats, and semantically enriched HTML for better reader experience to ensure they are easy to discover, access, cite and reuse.

Arthropod Systematics & Phylogeny succeeded the historical Entomologische Abhandlungen, formerly published by the Museum of Zoology, Dresden, in 2006. Its scope covers the taxonomy, morphology, anatomy, phylogeny, historical biogeography and palaeontology of arthropod taxa.

Similarly, Vertebrate Zoology was preceded by Zoologische Abhandlungen, also formerly published by the Museum of Zoology, Dresden. It deals with research on the taxonomy, morphology, anatomy, phylogeny, historical biogeography and palaeontology of vertebrates.

Meanwhile, Geologica Saxonica – Journal of Central European Geology, began its life in distant 1876, when it was founded under the name Mitteilungen aus dem Koniglichen Mineralogisch-Geologischen und Prahistorischen Museum by German geologist Hanns Bruno Geinitz, renowned for his work on the Carboniferous and Cretaceous rocks and fossils of Saxony.

“At Pensoft, we take pride in our latest partnership with the world-renowned natural history association of Senckenberg. “We are certain that our collaboration will bring many advantages to the research community: readers, authors and their affiliates alike,”

comments Pensoft and ARPHA’s founder and CEO Prof. Lyubomir Penev.

Senckenberg is not the first prestigious German research institution to enter into an agreement with Pensoft. Since 2014, the Natural History Museum Berlin has trusted the publisher with its own historical titles in the Biology domain: Deutsche Entomologische Zeitschrift and Zoosystematics and Evolution. In 2017, Evolutionary Systematics, another prominent journal with a legacy in the field of Zoology by the University of Hamburg followed suit. Zitteliana, a historical scholarly journal covering all fields of paleontology and geobiology by the State Natural History Collection of Bavaria (SNSB) is to also join the journal portfolio of Pensoft and ARPHA Platform in the next months.

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About Senckenberg:

Senckenberg, Research Institutes and Natural History Museums, conduct research in bio- and geoscience. Major research fields are biodiversity and ecosystem research and the research on the entire Earth-Human-Earth system. Senckenberg headquarters are located in Frankfurt am Main, but research on marine, terrestrial and climate systems is also housed at additional nine locations throughout Germany: in Dresden, Gelnhausen, Gorlitz, Hamburg, Messel, Muncheberg, Tubingen, Weimar and Wilhelmshaven. Senckenberg employs about 1,000 people, including 300 scientists. Senckenberg scientists are active in projects worldwide, most of which are international collaborations with universities and other research institutions. Senckenberg hosts biological and geological research collections with more than 35 million series.

IAVS and Pensoft launch a gold OA journal on vegetation classification on ARPHA Platform

Last summer, the International Association for Vegetation Science (IAVS) took the decision to launch a gold open-access academic journal, titled Vegetation Classification and Survey (VCS). Then, IAVS signed a contract with the scientific publisher and technology provider Pensoft and its self-developed innovative, fast-track scholarly platform ARPHA.

Now, VCS is officially online with the publication of its first six research articles and an exhaustive editorial, written by its four Chief Editors: Prof Dr Florian Jansen, Dr Idoia Biurrun, Prof Dr Jürgen Dengler and Dr Wolfgang Willner. They explain the mission and key features of the new journal. They also address the advantages and challenges of Open Access and share the ways VCS is to handle those.

VCS focuses on vegetation typologies and vegetation classification systems, their methodological foundation, development and application at any organisational and spatial scale. No restrictions are imposed on the methodological approaches used. 

Apart from original research papers that develop new vegetation typologies, the journal publishes applied studies that use such typologies, for example, in vegetation mapping, ecosystem modelling, nature conservation, land use management, or monitoring. Particularly encouraged are methodological studies that design and compare tools or algorithms for vegetation classification and mapping, vegetation databases and nomenclatural principles. Papers dealing with conceptual and theoretical bases of vegetation survey and classification are also welcome.

“We are delighted to welcome the latest journal by IAVS to the families of ARPHA and Pensoft. We are eager to support this wonderful Open Science initiative to facilitate access and uptake of research in this emerging field of vegetation science,”

comments Prof Lyubomir Penev, founder and CEO of ARPHA and Pensoft.

Amongst the appealing features of the new journal are its two permanent special collections: Ecoinformatics and Phytosociological Nomenclature. The former invites papers presenting vegetation-plot databases and other ecoinformatics data sources relevant for vegetation classification as well as concepts, methods and tools for using these, while the latter focuses on nomenclature issues of syntaxa.

Another novelty introduced by VCS is the implementation of double-blind peer review meant to reduce potential biases in academia. 

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Proving the international focus of VCS, the first published articles cover research from five continents. 

A Chinese study, conducted by the team of Dr Cindy Q. Tang (Yunnan University) analyses the forest structure, regeneration and growth trends of the commercially, culturally and economically important Yunnan pine tree.

The research team of Maged Abutaha (Desert Research Center) provides the first phytosociological classification of the vegetation units of Gebel Elba – an important arid mountain in Egypt – and the environmental factors controlling their distribution.

In their paper, Dr John Hunter (University of New England) and Vanessa Hunter use unsupervised techniques to produce a hierarchical classification of montane mires within the New England Tablelands Bioregion (NETB) of eastern Australia.

A national-scale phytosociological research of freshwater lake vegetation in Greece was conducted by the team of Dimitrios Zervas (Greek Biotope/Wetland Centre).

A Finite Mixture Model is proposed as an additional approach for classifying large datasets of georeferenced vegetation plots from complex vegetation systems by a large research team, led by Dr Fabio Attorre of the Sapienza University of Rome

A description of the remaining native vegetation of the Espinal province in central Argentina, presented by a research team, led by Dr Sebastián Zeballos (Instituto Multidisciplinario de Biología Vegetal, UNC-CONICET), calls for conservation measures to be taken to preserve the remaining forest patches. They also urge for the establishment of new protected natural areas.

“We would like to see more profound vegetation studies from species-rich regions, from both natural and anthropogenically influenced vegetation types,”

say the editors.

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Thanks to support from IAVS, VCS will be offering particularly attractive article processing charges (APCs) for submissions during the first two years. Moreover, significant discounts are available for IAVS members, members of the Editorial team and authors from low-income countries or with other financial constraints.

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Follow Vegetation Classification and Survey (VCS) on Twitter and Facebook.

Check out the official blog of the International Association for Vegetation Science (IAVS), where authors in any of the three IAVS journals are invited to submit blog contributions providing further insights into their work.

Acta Biologica Sibirica signs with Pensoft and moves to ARPHA

Acta Biologica Sibirica is a peer-reviewed open-access journal on the biodiversity of Siberia and the adjacent lands, published by Altai State University in collaboration with Pensoft Publishers

Acta Biologica Sibirica is an open-access, peer-reviewed journal on the biodiversity of Siberia and the adjacent lands by Altai State University. Since 2015, it has been publishing original research in the field of experimental and field biology.

Starting from 2020, Acta Biologica Sibirica moves to the full-featured technologically advanced platform ARPHA and will be published in collaboration with the scholarly publisher and technology provider Pensoft.

Pensoft’s original publishing system ARPHA allows Acta Biologica Sibirica to publish original research papers, reviews, short communications, letters and discussion papers, book reviews and memorial articles. The scholarly platform was designed to facilitate authors in the manuscript writing, submission and review process as end-to-end experience, including publication of the data and multimedia content in the form, suitable for both enhanced high-tech human and machine discoverability of the scholarly outputs.

Acta Biologica Sibirica accepts for publication papers in taxonomy, phylogeny, biogeography, faunistics, floristics, biological systematics, nature conservation and protected areas. In the fields of faunistics and floristics there are several types of articles, available for submission: floral and faunal lists on any region of the world, faunal and floral discoveries (e.g. species newly recorded in a particular region, additions to previously published inventories), papers on methodology of faunal and floral studies.

«Our basic task is to turn our journal into a high-quality world-class publication. Without the help of modern publishers, this is almost impossible. The choice of the publisher was perfectly logical – the reputation of Pensoft Publishers and its founder, the famous Bulgarian zoologist Lubomir Penev, is impeccable. To stand in one cohort with powerful publications with a long history is an honor for us. High standards of editing and reviewing manuscripts, the absolute level of originality and scientific novelty – these are the criteria on which we will rely»,

comments the editor-in-chief of the journal, Professor of Altai University Roman Yakovlev.

«At Pensoft, we are delighted to initiate this wonderful partnership with yet another renowned research institution in Russia, namely Altai State University. With our long-year experience in zoological and biodiversity research publishing and dissemination, I am certain that the journal has found a fitting place in the family of Pensoft and ARPHA»,

comments Prof. Lyubomir Penev, CEO and founder of Pensoft and ARPHA.

The first papers of 2020 are already available online on the new website of Acta Biologica Sibirica.

Within the pioneering papers published in the renewed journal, there is a research article about the first result of DNA-studies on the Central Asiatic owlet moths in the genus Euchalcia. The studied specimens were collected in Kyrgyzstan and Kazakhstan during the expeditions of the Russian Entomological Society in 2017-2019. When comparing a specific mitochondrial gene (cytochrome C oxidase subunit I or COI) between various species, the scientists revealed that the difference amongst European Euchalcia species is smaller than the one amongst high-mountainous Central Asiatic species.

Another study records the first occurrence of the moorland clouded yellow in Altai Region. The butterfly was found to share a mitochondrial barcode with some specimens from mountain populations from the Alps and the Czech Republic.

Colias palaeno, male, vicinity of Ozerki village, Talmenskiy district, Altai region, Russia
Credit: Nazar A. Shapoval
License: CC-BY 4.0
Colias palaeno, male, vicinity of Ozerki village, Talmenskiy district, Altai region, Russia
Credit: Nazar A. Shapoval
License: CC-BY 4.0

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Follow Acta Biologica Sibirica on Twitter and Facebook.

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Additional information

About Altai State University:

Altai State University is one of the leading Russian classical higher education institutions established in 1973. It is a major educational, research and cultural center located in the Asian part of the country, integrated into the international academic community, training the intellectual elite and conducting high-impact research.

The unique geographical position of Altai region, located in the center of Asia predestinates the University’s mission – to appear as an international research and educational center that integrates, develops and spreads the modern Western, Russian and Asian knowledge in education, science and culture within the Asian region.

About ARPHA:

ARPHA is the first end-to-end, narrative- and data-integrated publishing solution that supports the full life cycle of a manuscript, from authoring to reviewing, publishing and dissemination. ARPHA provides accomplished and streamlined production workflows that can be customized according to the journal’s needs. The platform enables a variety of publishing models through a number of options for branding, production and revenue models to choose from.

About Pensoft:

Pensoft is an independent academic publishing company, well-known worldwide for its innovations in the field of semantic publishing, as well as for its cutting-edge publishing tools and workflows. In 2013, Pensoft launched the first ever end to end XML-based authoring, reviewing and publishing workflow, as demonstrated by the Pensoft Writing Tool (PWT) and the Biodiversity Data Journal (BDJ), now upgraded to the ARPHA Publishing Platform. Flagship titles include: Research Ideas and Outcomes (RIO), One Ecosystem, ZooKeys, Biodiversity Data Journal, PhytoKeys, MycoKeys and many more.

Contacts: 

Prof. Lyubomir Penev, founder and CEO at ARPHA and Pensoft
Email: penev@pensoft.net

Prof. Alex Matsyura, Editor-in-Chief of Acta Biologica Sibirica
Email: amatsyura@gmail.com 

Prof. Roman Yakovlev, Editor-in-Chief of Acta Biologica Sibirica
Email: yakovlev_asu@mail.ru


Official EASE journal European Science Editing goes diamond OA with ARPHA

Starting from 2020, European Science Editing (ESE), the official journal of the European Association of Science Editors (EASE), has been relaunched as a fully Open Access journal with all content freely available and published as soon as accepted, on a new journal website hosted on ARPHA Platform.

This move is part of a strategic relaunch of the journal to provide greater focus on research and expert commentary that will inform and support editors working in the scholarly environment. The relaunch comes after several months of planning by a small working group of EASE Council members and ESE editors. Much of the non-research content previously published in the journal will now be published in the newly-created member magazine, the EASE Digest; for example, News notes, The editor’s bookshelf, Resources, and interviews.

The journal is being relaunched with a new editorial board, but retaining the same Chief Editor, Ksenija Bazdaric, managing editor Dado Cakalo and associate editor associate editors Hrvoje Jakovac, Tom Lang and Joan Marsh. An introductory editorial published in the journal explains the changes.

Introductory editorial by ESE’s Chief Editor, Ksenija Bazdaric. Openly available from https://doi.org/10.3897/ese.2020.e50566.

The new editorial board comprises distinguished members from all over the world: Eva Baranyiova (Czech Republic), Lisa Colledge (UK), Moira Hudson (UK), Olga Kirillova (Russia), Zafer Kocak (Turkey), Rachael Lammey (UK), Vladimir S Lazarev (Belarus), John Loadman (Australia), Herve Maisonneuve (France), Ana Marusic (Croatia), Arjan Polderman (The Netherlands), Maria del Carmen Ruiz Alcocer (Mexico), Karen Shashok (Spain), Cem Uzun (Turkey), and Quan Hoang Vuong (Vietnam).

Ever dedicated to be a source of peer-reviewed information on all aspects of scholarly editing and publishing (i.e. research integrity, peer review, scientometrics, open science, predatory publishing, statistics), writing, translation and ethics, ESE welcomes editorials, original research articles, reviews, viewpoints and correspondence items.

ESE has moved to its new website, provided by the open-access scholarly publishing platform ARPHA (developed by scientific publisher and technology provider Pensoft), for all new articles, although the archive content will remain on the old website. This new website provides better delivery of the journal content and will help to make the journal easier to discover.

“I am happy to be working with the ARPHA team and that ESE has moved to a completely new platform which will raise the profile of editorial research and topics,”

Ksenija Bazdaric, ESE’s Chief Editor.

“At EASE we are delighted to be working with ARPHA and Pensoft to publish the journal in its new format. There has been considerable work invested in relaunching the journal with a new focus so that we can raise the profile of research about editing and the value that editors provide in the scholarly environment. An important part of the relaunch was ensuring greater visibility of the journal content and we are confident that ARPHA can help us achieve this,”

Pippa Smart, President, EASE.

“It could only make us proud at ARPHA that such a pillar in the world of scholarly communication has chosen our publishing platform to make the crucial step towards Open Access. I am certain that by opening up and digitalising its content right away, EASE will greatly facilitate and expedite the improvement of quality and integrity of science on the global scene,”

ARPHA’s and Pensoft’s founder and CEO Prof. Lyubomir Penev. “

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Follow European Science Editing on Twitter.

Viticulture Data Journal: Non-conventional papers foster Open Science & sustainability

Non-conventional, yet pivotal research results: data, models, methods, software, data analytics pipelines and visualisation methods, related to the field of viticulture, find a place in a newly launched, open-access and peer-reviewed Viticulture Data Journal (VDJ). The journal went live with the publication of an introductory editorial and a data paper.

The publishing venue is one of the fruits borne during the collaboration between scholarly publisher and technology provider Pensoft, its self-developed ARPHA Platform and the EU project AGINFRA+, whose mission is to provide a sustainable channel and data infrastructure for the use of cooperating, but not fully connected user communities working within the agricultural and food sciences. 

The novel journal brings together a wide range of topics related to the field of viticulture: from genetic research, food safety of viticultural products to climate change adaptation of grapevine varieties through grape specific research. Amongst these are:

  • Phenotyping and genotyping
  • Vine growth and development
  • Vine ecophysiology
  • Berry yield and composition
  • Genetic resources and breeding
  • Vine adaptation to climate change, abiotic and biotic stress
  • Vine propagation
  • Rootstock and clonal evaluation
  • Effects of field practices (pruning, fertilization etc.) on vine growth and quality
  • Sustainable viticulture and environmental impact
  • Ampelography
  • Plant pathology, diseases and pests of grapevine
  • Microbiology and microbiological risk assessment
  • Food safety related to table grapes, raisins, wine, etc.

With the help of the ARPHA Platform’s signature writing tool, authors are able to use a set of pre-defined, yet flexible manuscript templates: Data Paper, Methods, Emerging Techniques, Applied Study, Software Description, R Package and Commentary. Furthermore, thanks to the advanced collaborative virtual environment provided by the tool, authors, but also reviewers, editors and other invited contributors enjoy the convenience of working within the same consolidated online file all the way from the authoring and peer review stages to copy editing and publication.

“The Viticulture Data Journal was created to respond to the major technological and sociological changes that have influenced the entire process of scholarly communication towards Open Science,”

explain the editors.

“The act of scientific publishing is actually the moment when the long effort of researchers comes to light and can be assessed and used by other researchers and the wider public. Therefore, it is little wonder that the main arena of transition from Open Access to Open Science was actually the field of academic publishing,”

they add.

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The first research publication made available in VDJ is a data paper by the research team from Agricultural University of Athens: Dr Katerina Biniari, Ioannis Daskalakis, Despoina Bouza and Dr Maritina Stavrakaki. In their study, they assess and compare both the qualitative and quantitative characters of the grape cultivars ‘Mavrodafni’ and ‘Renio’, grown in different regions of the Protected Designation of Origin Mavrodafni Patras (Greece). The associated dataset, containing the mechanical properties, the polyphenolic content and the antioxidant capacity of skin extracts and must of berries of the two cultivars, is available to download as supplementary material from the article.  

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During the AGINFRA+ project, ARPHA has been extended to be used from the AGINFRA+ Virtual Research Environment (VRE), which would allow the authors to use the VRE as an additional gate to the AWT and the journal, as well as to benefit from the integration of AWT with several other services offered by the AGINFRA+ platform. The AGINFRA+ platform has been designed as a Gateway providing online access through a one-stop endpoint to services, aiming at the integration of the traditional narrative of research articles with their underlying data, software code and workflows.

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Viticulture Data Journal is indexed by Altmetric, CrossRef, Dimensions, EBSCOhost, Google Scholar, Mendeley, Microsoft Academic, Naviga (Suweco), OCLC WorldCat, OpenAIRE, OpenCitations, ReadCube, Ulrichsweb™, Unpaywall; and archived at CLOCKSS and Zenodo

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Follow Viticulture Data Journal on Twitter and Facebook.

Seven journals moving to ARPHA in early 2020 showcase the versatility of the publishing platform

A full-featured, open access publishing platform for journals, books and data, which comes with an extensive list of services and features – both automated and human-provided – to adapt to the individual needs of any client journal. But how does that translate into practice? 

The latest scholarly titles to join the ranks of ARPHA might just provide a perfect example of the capabilities of the platform to accommodate the specificity of scholarly journal across sciences, audiences, geographies and languages.

Amsterdam University Press strengthens partnership with ARPHA by launching two brand new journals

Journal of European Landscapes (JEL) and Heritage, Memory and Conflict Journal (HMC) add up to the partnership between ARPHA and Amsterdam University Press (AUP), which started in early 2018 with the transfer of the only Dutch-language open-access journal focussing on accountancy, business economics and related areas: Accountancy and Business Economics, or Maandblad voor Accountancy en Bedrijfseconomi (MAB).

Homepage of Amsterdam University’s journal Accountancy and Business Economics (Maandblad voor Accountancy en Bedrijfseconomi), using the white-label publishing solution of ARPHA Platform.

Not only was MAB the first journal on the platform that publishes articles exclusively in a language other than English, but also became an impressive precedent with its nearly 100-year content that got successfully dusted off and fitted into the user-friendly digital environment of today. All papers ever issued in MAB since its launch in 1923, were re-published, so that each could be assigned with a DOI; have its metadata registered on CrossRef; and its article content fully searchable within the PDF copy.

All three make use of ARPHA’s white-label publishing solution, which allows for AUP to carry its recognisable logo through a unified banner across the websites of the journals. Unlike MAB, however, JEL and HMC are to have their articles published exclusively in English to further promote their international scope and focus.

Heritage, Memory and Conflict Journal (HMC)

Homepage of the new Heritage, Memory and Conflict Journal published by Amsterdam University Press via ARPHA Platform.

Heritage, Memory and Conflict Journal is a brand new journal launched to trace back the remnants of the past – be it physical or anecdotal – back to their roots in the days of old. How do memory sites and discourses operate as vehicles at local, national and transnational levels and what indeed is the ‘cargo’ they carry? This is the type of questions authors from across disciplines – academic, artistic and industrial – will be trying to answer when preparing their manuscripts for HMC

Journal of European Landscapes (JEL) 

Homepage of the new Journal of European Landscapes published by Amsterdam University Press via ARPHA Platform.

Similarly, the second newly launched Journal of European Landscapes is to turn to history and cultural heritage, in order to understand the present use of the past when it comes to landscape. JEL’s founders point out that while Europe’s landscapes have so far enjoyed quite a lot of scientific attention, there isn’t a journal to address its indisputable and critical connection to heritage, even though the latter is what connects historical research with modern planning and management.

Vegetation Classification and Survey (VCS)

Homepage of the new Vegetation Classification and Survey journal published by the International Association for Vegetation Science via ARPHA Platform.

Adding up to the landscape topic is the Vegetation Classification and Survey (VCS) journal. This is the latest outlet launched by the International Association for Vegetation Science (IAVS): a worldwide union of scientists and other aficionados of theory and practice concerning the study of vegetation. 

With its transfer to ARPHA, VCS fulfils the mission of the union to move to Open Access. Interestingly, the journal supports two permanent sections: Ecoinformatics and Phytosociological Nomenclature. There, authors can submit certain unique article types: Review and Synthesis and Short/Long Database Reports. 

Devoted to plant community ecology, VCS publishes original research that works toward the development of novel vegetation classifications, as well as applied studies that use such typologies. Particularly encouraged are methodological studies that design and compare tools for vegetation classification and mapping. 

Plant Sociology 

Homepage of the new Plant Sociology journal published by Società Italiana di Scienza della Vegetazionevia ARPHA Platform.

Another modern botany journal still awaiting its first issue since its transfer to ARPHA, is Plant Sociology, brought to life by the “Società Italiana di Scienza della Vegetazione” (SISV) with the aim to succeed the historical journals of the society: Fitosociologia (1990-2011) and Notiziario della Società Italiana di Fitosociologia (1964-1989).

The editorial management opted to have the journal co-published with Pensoft: the academic publisher and technology provider standing behind ARPHA. Thus, by default, the journal receives some extra perks as a result of Pensoft’s partnerships with leading innovators in the scholarly communication domain.  An excellent example would be the indexing and addition of each Plant Sociology article by the research discovery platform ScienceOpen in the “Pensoft Biodiversity” collection, following a recent strategic collaboration between the two Open Science champions.

With a wide scope covering vegetation studies from plant community to landscape level, Plant Sociology puts a special focus on topics such as plant sociology and vegetation survey for developing ecological models, as well as plant classification, monitoring, assessment, management and conservation, as long as the studies are based on rigorous and quantitative measures of physical and biological components.

Caucasiana

Adding up to the well-pronounced biodiversity theme in ARPHA’s and Pensoft’s journal portfolios, as well as the “Pensoft Biodiversity” collection on ScienceOpen, is the first Georgian journal to join the lines of the publishing platform. Caucasiana is to be co-published by the top biodiversity research centre in the region: Ilia State University in Tbilisi and Pensoft.

The scholarly outlet that we’ll soon see on ARPHA Platform is in fact a successor of an earlier journal launched by the Institute of Zoology of the Georgian Academy of Science that has been revamped top-to-bottom. Transformed into a technologically advanced publishing venue, Caucasiana’s task is to handle the growing research interest in the incredible, yet surprisingly overlooked animal, plant and fungal life of Caucasus and adjacent regions. 

Research published in Caucasiana will be well-positioned to bring this hotspot of biodiversity and endemism into focus for the global conservation movement.

The EASE Journal: European Science Editing (ESE)

The quarterly journal of the European Association of Science Editors (EASE): European Science Editing (ESE) is a key news source for all actors involved in scholarly publishing.

For the first time, ESE will open up its content to the public from day one of its publication, thanks to its move to ARPHA. While digital and print subscriptions used to be included as part of the association’s membership packages, other readers would have had to wait six months after print publication to receive free access.

Launched in 2003, ESE’s aim has been to keep editors posted about everything they need to know concerning scholarly communication. To do so, the journal publishes research articles, meeting reports, essays and viewpoints, as well as book and website reviews. Especially for members of the association, ESE takes care to highlight upcoming events and provide resources and publications, considered to be of their interest. 

Bulgarian Journal of Cardiology

In 2020, ARPHA will also welcome the third Bulgarian-born academic journal and the fourth covering the field of Medical Sciences to its open-access portfolio: the journal of Bulgaria’s National Cardiac Society, which is part of the European Society of Cardiology (ESC).

For the first time, the Bulgarian Journal of Cardiology will make use of the soon-to-be-released English-Bulgarian bilingual publishing solution from ARPHA. Similarly to the English-Russian approach to journal publishing, which was presented in Moscow in early December, ARPHA will allow for users of the Bulgarian Journal of Cardiology to not only publish papers in both English and Bulgarian, but also enjoy a top-to-bottom Bulgarian user interface.

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Learn more about ARPHA’s key features and achievements from 2019 in our yearly recap.

ARPHA Platform’s content integrated into ScienceOpen to take advantage of novel streams of science communication

The research discovery platform ScienceOpen and Pensoft Publishers have entered into a strategic collaboration with the aim of strengthening the companies’ identities as the leaders of innovative content dissemination. The new cooperation will focus on the unified indexation, the integration of Pensoft’s ARPHA Platform content into ScienceOpen and the utilization of novel streams of scientific communication for the published materials.

Pensoft is an independent academic publishing company, well known worldwide for bringing novelty through its cutting-edge publishing tools and for its commitment to open access practices. In 2013, Pensoft launched the first ever, end-to-end, XML-based, authoring, reviewing and publishing workflow, now upgraded to the ARPHA Publishing Platform. As of today, ARPHA hosts over 50 open access, peer-reviewed scholarly journals: the whole Pensoft portfolio in addition to titles owned by learned societies, university presses and research institutions.

As part of the strategic collaboration, all Pensoft content and journals hosted on ARPHA are indexed in the ScienceOpen’s research and discovery environment, which puts them into thematic context of over 60 million articles and books. In addition, thousands of articles across more than 20 journals were integrated into a “Pensoft Biodiversity” Collection. Combined this way, the content benefits from the special infrastructure of ScienceOpen Collections, which supports thematic groups of articles and books equipped with a unique landing page, a built-in search engine and an overview of the featured content. The Collections can be reviewed, recommended and shared by users, which facilitates academic debate and increases the discoverability of the research.

The Pensoft Biodiversity collection on ScienceOpen.

“It is certainly great news and a much-anticipated milestone for Pensoft, ARPHA and our long-year partners and supporters from ScienceOpen to have brought our collaboration to a new level by indexing the whole ARPHA-hosted content at ScienceOpen,” comments Pensoft’s and ARPHA’s CEO and founder Prof. Lyubomir Penev. “Most of all, the integration between ARPHA and ScienceOpen at an infrastructural level means that we will be able to offer this incredible service and increased visibility to newcoming journals right away. On the other hand, by streaming fresh and valuable publicly accessible content to the ScienceOpen database, these journals will be further adding to the growth of science in the open.”

Stephanie Dawson, CEO of ScienceOpen says, “I am particularly excited to add new high-quality, open access biodiversity content from Pensoft Publishers to the ScienceOpen discovery environment as we have a very active community of researchers on ScienceOpen creating and sharing Collections in this field. We are looking forward to working with Pensoft’s innovative journals to support their open science goals.”

The collaboration reflects not only the commitment of both Pensoft and ScienceOpen to new methods of knowledge dissemination, but also the joint mission to champion open science through innovation. The two companies will cooperate at a strategic level in order to increase the international outreach of their content and services, and to make them even more accessible to the broad community.

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About ScienceOpen:

From promotional collections to Open Access hosting and full publishing packages, ScienceOpen provides next-generation services to academic publishers embedded in an interactive discovery platform. ScienceOpen was founded in 2013 in Berlin and Boston by Alexander Grossmann and Tibor Tscheke to accelerate research communication.