Pensoft launches ORPHO: A new intelligent workspace for scientific writing

Scholarly publisher and technology provider Pensoft Publishers announces the beta launch of ORPHO, a revolutionary online platform designed to streamline collaborative scientific writing and produce AI-ready, future-proof scholarly literature. 

ORPHO presents a significant advancement in scholarly publishing technology, combining intuitive writing features with sophisticated semantic enrichment capabilities. The new platform builds upon Pensoft’s fifteen years of experience as a developer of semantic publishing infrastructure.

Key Features

Within a shared online workspace, researchers can start with built-in customisable templates, create their own or import an existing file. They can then team up with collaborators in real time using track changes, role-based user rights, inline comments, and document-level chat. More significantly, ORPHO automatically structures scientific content according to international publishing standards, making research outputs findable, discoverable, interoperable and reusable (FAIR) once published. 

Unlike its predecessor, the ARPHA Writing Tool, ORPHO is available as a standalone real-time collaborative workspace decoupled from journals hosted on Pensoft’s ARPHA Publishing Platform. Once a manuscript is ready, authors receive AI-FAIR machine-readable content that can be formatted to meet multiple journal requirements at the click of a button.

The platform’s adaptability to domain-specific workflows is currently being piloted in biodiversity science. ORPHO integrates seamlessly with leading biodiversity data aggregators, including the Global Biodiversity Information Facility (GBIF), Barcode of Life Data Systems (BOLD) and PlutoF, via import and export facilities for structured data, making ORPHO particularly valuable for researchers handling taxonomic, ecological and biodiversity data. 

Taxon names, for example, can be automatically imported and linked through persistent identifiers from sources like the Catalogue of Life (CoL), International Plant Names Index (IPNI), World Register of Marine Species (WoRMS) and World Flora Online (WFO).

Why ORPHO?

The name draws inspiration from multiple sources which reflect the tool’s philosophy and heritage. Named after Orphium: a unique plant genus endemic to South Africa whose sole species (Orphium frutescens) is known as the sea rose, ORPHO reflects the platform’s distinctive nature, heritage, and core philosophy.

It also evokes Orpheus, the legendary musician of ancient Thrace whose home region, the Rhodopi Mountains, lies in present-day Bulgaria, where ORPHO’s developer, Pensoft, is headquartered. The name thus honours the tool’s origins whilst embodying the exceptional creative performance it enables. 

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Prof. Dr. Lyubomir Penev, founder and CEO of Pensoft, comments:

“We are well aware that researchers today face an overwhelming list of formatting requirements and technical demands in an AI-driven landscape. It is true that rapid technological advancement presents both immense opportunities and mounting complexities for researchers.

We built ORPHO to remove that friction by offering an intuitive, collaborative workspace that lets scientists focus on their research. As a scientific publisher, our mission is to make scholarly publishing a seamless, rewarding experience fit for the modern age.”

The beta release invites researchers, institutions and publishing platforms to trial ORPHO and provide feedback. Access is available at orpho.net.

Pensoft and ARPHA join forces with Reviewer Credits to enhance peer review transparency and recognition

Pensoft, the independent academic publishing company known for its innovative open access publishing tools, workflows, and technologically advanced platforms for text and data publishing, is pleased to announce a new partnership with Reviewer Credits, the Berlin-based network for peer reviewers and publishing integrity hub. The collaboration also encompasses ARPHA, Pensoft’s publishing platform that supports the entire scholarly publishing workflow with cutting-edge semantic tagging, collaborative manuscript authoring, and transparent peer review.

Reviewers who create a free account on Reviewer Credits will automatically record their peer review contributions, which will be certified via the platform and earn rewards and recognition within the scholarly community. While a reviewer can register any of their peer reviews on the platform, reviews for journals partnering with Reviewer Credits earn additional redeemable credits.

“Our partnership with Reviewer Credits is important for recognising and rewarding the contribution of our reviewers,” said Prof. Lyubomir Penev, Founder and CEO of Pensoft. “Good reviewers are essential for ensuring the publication of quality science. In the past, their role has been overlooked, and collaborations like this are important steps towards changing that.”

“This partnership between Reviewer Credits and Pensoft/ARPHA represents a significant step forward in recognizing and rewarding the vital contributions of peer reviewers, enhancing transparency, and strengthening the integrity of scholarly publishing for the entire research community” said Sven Fund, Managing Director at Reviewer Credits, “This collaborative approach not only incentivizes reviewers by formally documenting their efforts and providing tangible recognition, but also democratizes participation in peer review—empowering researchers at every career stage to contribute meaningfully, build networks, and advance standards of transparency and accountability within the global research community.”

About Reviewer Credits: Reviewer Credits is the global network that recognizes and rewards the vital contribution peer reviewers make to scientific publishing. The Berlin-based sciencetech company collaborates with more than 220 international publishing houses and around 1,800 academic journals and is home to over 43,000 reviewers. Around 300,000 reviews have already been uploaded to the Reviewer Credits platform. For more details, see www.reviewercredits.com.

ARPHA 2023: A year in review

ARPHA 2023 Review

2023 was a fantastic year for ARPHA, marked by a series of significant milestones and innovations in our scholarly publishing mission. As we reflect on the past year, we are excited to share the major strides taken by our dedicated in-house team to provide the best customised, end-to-end services for our clients.

Expansion of the ARPHA journal family

ARPHA welcomed new and diverse titles into its fold, demonstrating a commitment to promoting open-access research across many disciplines.

The Aquatic Invasions journal

This journal found a new home on ARPHA, enhancing its visibility and impact in the scientific community. Focused on biological invasions in both inland and coastal water ecosystems from around the world, Aquatic Invasions is an official journal of the International Association for Open Knowledge on Invasive Alien Species.

Atomic Layer Deposition

Catering to cutting-edge research in the field of material sciences, this journal launched on ARPHA in March. Atomic Layer Deposition targets scientists specialising in all aspects of Atomic Layer Deposition and related alternating vapour phase technologies.

Estuarine Management and Technologies

Another significant addition to our platform, this journal focuses on the technological facets of researching, managing, and preserving estuarine environments.

The addition of these titles is indicative of things to come, with more exciting entries expected to join ARPHA in 2024.

ARPHA’s strategic partnerships and integrations

ARPHA’s commitment to increasing the reach and impact of scientific research led to noteworthy collaborations in 2023.

ResearchGate integration

Our partnership with ResearchGate significantly boosted readership and visibility for our open-access publications; we saw a 2-5 times increase in article views for journals that opted in to have their context indexed. 20 Pensoft journals were indexed, including the flagship titles ZooKeys, PhytoKeys, MycoKeys, Biodiversity Data Journal and Research Ideas and Outcomes.

Scite.ai collaboration

This integration enhances the understanding of articles’ scientific impact and reuse, offering valuable insights to both readers and authors. With scite.ai, every citation is categorised as Supporting, Contrasting, or Mentioning, based on the context of surrounding sentences within the citing publication.

Enhancements and accolades

Our continuous efforts in tech infrastructure and design services yielded notable achievements and recognitions.

ARPHA PDF layout revamp

New ARPHA PDF layout
Research papers published in ZooKeys demonstrating the former (left) and the current (right) article layout seen in the PDF format. 

We introduced a modernised layout for the PDF format of articles, enriching the reading experience. The new format focuses on readability and accessibility, implementing many changes requested by the scientific community.

ARPHA Writing Tool and nanopublications

Our innovative XML-based authoring tool now supports a novel workflow for nanopublications in biodiversity research, piloted at the Biodiversity Data Journal.

European Reference Index for the Humanities and Social Sciences (ERIH PLUS)

Six of our journals proudly joined this index, including four Pensoft journals: Nature ConservationNeoBiotaNeotropical Biology and Conservationand Fossil Record. The Journal of the Bulgarian Geographical Society and the Amsterdam University Press’ Heritage, Memory and Conflict (HMC), which use ARPHA’s white-label publishing solution, were also accepted.

New on Scopus

The Bulgarian Society of Cardiology’s journal’s inclusion in Scopus marked a significant achievement. The journal met several criteria, including: immaculate peer review and editorial processes; a good and consistent yearly publication volume; high-quality and user-friendly website and infrastructure; well-pronounced internationality and inclusivity; and considerable readership and citation rates.

New on Web of Science

One Ecosystem‘s selection for inclusion in this index was a testament to its quality and integrity. The news means that One Ecosystem might see its very first Journal Impact Factor (JIF) as early as 2024, following the latest revision of the metric’s policies Clarivate announced last July. According to the update, all journals from the Web of Science Core Collection are now featured in the Journal Citation Reports, and thereby eligible for a JIF.

Keeping pace with scholarly publishing trends

Staying at the forefront of scholarly publishing, we continuously adapted to the latest best practices and addressed our clients’ needs.

ARPHA’s advisory role in journal comparison service

Pensoft’s involvement in developing the Journal Comparison Service by cOAlition S reflected our commitment to shaping the future of open-access publishing. The service freely and securely enables libraries, library consortia, and funders to understand if the fees they pay are commensurate with the publication services delivered.

EU’s conclusions on OA scholarly publishing

Our official statement aligned with the EU’s stance, emphasising our support for open-access initiatives. We highlighted the need to promptly address existing issues in the publishing system, so that healthy competition can thrive and contribute to a reality safe from monopolies and corporate capture.

Addressing ARPHA client needs

Our feature blog piece, “6 Common Mistakes at Society and Institutional Journals,” showcased our understanding and proactive approach to addressing the concerns of our clients.

As we progress into 2024, ARPHA remains dedicated to enhancing the scientific impact and visibility of our journals, leveraging technology and collaborations to serve the ever-evolving needs of the scholarly community. We thank our partners, clients, and contributors for being part of this exciting journey as we look forward to another successful year.

For news from & about ARPHA and the journals using the platform, you can follow us on Twitter and Linkedin.

Pensoft partners with Zendy to enhance academic accessibility

Zendy and Pensoft partnership

Pensoft has announced a partnership with Zendy, a leading online platform for free and affordable academic content. This collaboration marks a significant milestone in both companies’ efforts to make scientific research more accessible and widely disseminated.

Zendy has an extensive digital library that provides users with easy access to a wealth of academic materials, including journals, articles, and e-books. Their free online library, Zendy Open, collates quality open-access research and is available worldwide.

The partnership integrates Pensoft’s diverse range of high-quality, peer-reviewed journals into Zendy’s platform. This includes the publisher’s flagship titles ZooKeys, PhytoKeys, MycoKeys, Biodiversity Data Journal and Research Ideas and Outcomes (RIO Journal) amongst others, which will now have their content automatically added to the platform and freely accessible.

Zendy’s website, featuring key information about the platform.

Pensoft’s journals are powered by ARPHA and cover various fields of science, emphasising biodiversity, environmental, and ecological studies. By making content available on Zendy, Pensoft aims to support the academic community’s needs and foster an environment of discovery.

Zendy’s innovative platform, with user-friendly interface and advanced AI-powered features, enhances the research experience by simplifying the discovery and retrieval of relevant academic content. This aligns with Pensoft’s commitment to embracing technological advancements to improve the accessibility and impact of scientific research.

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For more information about Zendy, visit their website.
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Pensoft and ARPHA partner with scite.ai to dig deeper into article citations

In the ever-evolving landscape of academic publishing, comprehensive and informative citation metrics can make all the difference. Pensoft, the scholarly publisher and technology provider, and the innovative scite.ai platform, have partnered to provide a novel service that is looking to change the way readers perceive and utilise citation data.

scite.ai has been making waves in the scholarly world with its pioneering approach to citation metrics. At the heart of their offering are two distinctive badges, elegantly displayed on the article’s page to let readers gain deeper insights into how a publication is cited by other indexed works. 

Each citation is categorized as Supporting, Contrasting, or Mentioning, based on the context of surrounding sentences within the citing publication. This way, anyone can explore not just how many times a document has been cited but also why.

The feature is already accessible under the Metrics tab of any research paper published by a Pensoft journal. The first scite.ai badge displays the number of citations, breaking them down into Supporting, Contrasting, or Mentioning; the second one offers insights on the sections of an article where the citations were featured.

At Pensoft, we are confident that this new functionality enhances the discoverability and contextual richness of articles published in our journals. The integration also  empowers Pensoft’s users to gain deeper insights into their research. Whether you’re a scientist seeking to validate your research or a reader in search of authoritative sources, this new feature promises to enrich your academic journey.

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Stay up to date with the latest integrations and features available at journals published by Pensoft by following ARPHA Platform on Twitter and Linkedin.

FAIRer knowledge about biodiversity with AI-friendly nanopublications at Biodiversity Data Journal

Earlier this year, in a pilot project, the teams of high-tech startup Knowledge Pixels and open-access scholarly publisher and technology provider Pensoft released a novel workflow to publicly share and future-proof scientific findings by means of nanopublications.

Nanopublications complement human-created narratives of scientific knowledge with elementary, machine-actionable, simple and straightforward scientific statements that prompt sharing, finding, accessibility, citability and interoperability. By making it easier to trace individual findings back to their origin and/or follow-up updates, it also helps to better understand the provenance of biodiversity data.

These semantic statements expressed in community-agreed terms, openly available through links to controlled vocabularies, ontologies and standards, are not only freely accessible to everyone in both human-readable and machine-actionable formats, but also easy-to-digest for computer algorithms and AI-powered assistants.

Now, the collaborators – also partly supported by the Horizon 2020-funded project BiCIKL (abbreviation for Biodiversity Community Integrated Knowledge Library) – have built up on a pilot workflow already launched in the Biodiversity Data Journal – to create a specialised nanopublication solution to address the need for FAIR (Findable, Accessible, Interoperable and Reusable) data in the biodiversity science domain. 

In their studies, researchers need to use and refer to extensive and diverse biodiversity data at once, e.g. information about groups of organisms and their classification, collections, authors and genetic sequences. However, those would normally be scattered across a vast number of articles or belong to dissociated databases. This is a major and widely recognised issue in biodiversity science, which is currently stagnating progress not only in building up the world’s knowledge about the natural world around us, but also impeding biodiversity conservation and ecosystem restoration.

Using the newly released nanopublication workflow, biodiversity researchers can now incorporate nanopublications within their manuscripts to future-proof their most important assertions on biological taxa and organisms or statements about associations of taxa or organisms and their environments. 

In addition, the authors can also create standalone nanopublications that comment or derive from already existing research journals published in an academic journal or another citable source (e.g. expert database), regardless of the author of the source. 

“With the nanopublication format, authors make sure that key scientific statements – the ones underpinning their research work – are efficiently communicated in a machine-actionable and FAIR manner. Thus, their contributions to science become future-proof for a reality driven by AI technology,”

explains Prof. Lyubomir Penev, founder and CEO at Pensoft.

“Biodiversity is the ideal field for this pilot exploring the next steps in scientific publishing. Biodiversity and its neighbouring fields have produced a remarkable number of high-quality resources, such as controlled vocabularies and databases, which we can now build upon. Moreover, many Biodiversity researchers have shown to be very open to such new methods and are enthusiastic about working together to build a more powerful ecosystem for scientific knowledge sharing, and we share their enthusiasm,”

says Tobias Kuhn, CTO and co-founder of Knowledge Pixels. 

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You can find more about the nanopublication workflow and its advantages to biodiversity scientists on the Pensoft blog and the Biodiversity Data Journal website.

ARPHA’s and Pensoft’s statement on the European Union’s Conclusions on OA scholarly publishing

On behalf of ARPHA Platform and Pensoft Publishers, we express our support for the Conclusions on high-quality, transparent, open and equitable scholarly publishing, recently published by the Council of the European Union. We do share all concerns articulated in the document that highlight major inequities and outstanding issues in the scholarly publishing environment.

In our opinion, it is of utmost importance to promptly address the existing issues in the publishing system, where healthy competition can thrive and contribute to a reality safe from potential mono-/oligopolies and corporate capture.

We firmly believe that only an industry that leaves room for variously-scaled pioneers and startups is capable of leading a long-awaited shift to a high-quality, transparent, open and equitable scholarly publishing landscape aligning with the principles of FAIRness.

Yet, we shall acknowledge that the industry has so far failed to eradicate the most fundamental flaw of the past. In the beginning, the main aim of the Open Access (OA) movement was removing the barrier to access to publicly funded scientific knowledge and scrapping costly subscription fees.

Recently, however, the industry’s biggest players merely replaced it with a barrier to publication by introducing costly Article Processing Charges (APCs) and “big deals” signed between top commercial publishers and academic institutions or national library consortia. 

As a result, small and middle-sized open-access publishers, which have, ironically, been the ones to lead the change and transition to OA by default and oppose the large commercial publishers’ agenda, were effectively pushed out of the scene. Further, we are currently witnessing a situation where OA funds are mostly going to the ones who used to oppose OA.

So, we strongly support measures that ensure an inclusive and FAIR competition, which could in turn prompt quality, sustainability and reasonable pricing in scholarly publishing. In our opinion, an environment like this would actually foster equality and equity amongst all publishers, either small, large, non-profit, commercial, institutional or society-based. 

One of the main points of the conclusions is a recommendation for a general use of the Diamond OA model, where no charges apply to either researchers or readers. While we fully support the Diamond OA model, we wish to stress on the fact that considerable concerns about the sustainability of existing Diamond OA models remain.

On the one hand, there are OA agreements (also known as read-and-publish, publish-and-read, transformative agreements etc.), typically signed between top publishers and top research institutions/consortia. This OA model is often mistakenly referred to as “Diamond OA”, since authors affiliated with those institutions are not concerned with providing the APC payment – either by paying themselves or applying for funding. Instead, the APCs are paid centrally. Most often, however, journals published by those publishers are still directly charging authors who are not members of the signed institutions with, in our opinion, excessive APCs. Even if those APCs are covered by a signed institution, these are still considerable funds that are being navigated away from actual research work. 

On the other hand, there are independent researchers, in addition to smaller or underfunded institutions, typically – yet far from exclusively – located in the developing world, who are effectively being discriminated against. 

In conclusion, this type of contracts are shutting away smaller actors from across academia just like they used to be under the subscription-based model. Hereby, we wish to express our full agreement with the Council of the European Union’s conclusion, that “it is essential to avoid situations where researchers are limited in their choice of publication channels due to financial capacities rather than quality criteria”.

There are also several alternative OA models designed to lessen the burden of publication costs for both individual researchers, libraries and journal owners. However, each comes with its own drawbacks. Here – we believe – is where the freedom of choice is perhaps most needed, in order to keep researchers’ and publishers’  best interests at heart. 

One of those alternatives is open-source publishing platforms, which – by design – are well-positioned to deliver actual Diamond OA for journals, while maintaining independence from commercial publishers. However, the operational model of this type of publishing and hosting platforms would most often only provide a basic infrastructure for editors to publish and preserve content. As a result, the model might require extra staff and know-how, while remaining prone to human errors. Additionally, a basic technological infrastructure could impede the FAIRness of the published output, which demands advanced and automated workflows to appropriately format, tag semantically and export scientific outputs promptly after publication.

Similarly, large funders and national consortia have put their own admirable efforts to step up and provide another option for authors of research and their institutions. Here, available funds are allocated to in-house Diamond OA publishing platforms that have originally been designed according to the policies and requirements of the respective funding programme or state. However, this type of support – while covering a large group of authors (e.g. based in a certain country, funded under a particular programme, and/or working in a specific research field) – still leaves many behind, including multinational or transdisciplinary teams. Additionally, due to the focus on ‘mass supply’, most of these OA publishing platforms have so far been unable to match their target user base with the appropriate scale of services and support.

What we have devised and developed at Pensoft with the aim to contribute to the pool of available choices is an OA publishing model, whose aim is to balance cost affordability, functionality, reliability, transparency and long-term sustainability. 

To do so, we work with journal owners, institutions and societies to create their own business and operational model for their journals that matches two key demands of the community: (1) free to read and free to publish OA model, and, (2) services and infrastructure suited for Diamond OA at a much lower cost, compared to those offered by major commercial publishers.

In our opinion, independent small publishers differentiate from both large commercial publishers and publicly funded providers by relying to a greater extent on innovative technology and close employee collaboration.

As a result, they are capable of delivering significantly more customisable solutions – including complete packages of automated and human-provided services – and, ultimately, achieving considerably lower-cost publishing solutions. Likewise, they might be better suited to provide much more flexible business models, so that libraries and journal owners can easily support (subsets of or all) authors to the best of their capabilities.

While we realise that there is no faultless way to high-quality, transparent, open and equitable scholarly publishing, we are firm supporters of an environment, where healthy competition prompts the continuous invention and evolution of tools and workflows

Our own motivation to invest in scholarly publishing technology and its continuous refinement and advancement, coupled with a number of in-house and manually provided services, which is reflected in our APC policies, aligns with the Council’s statement that “scientific practices for ensuring reproducibility, transparency, sharing, rigour and collaboration are important means of achieving a publishing system responsive to the challenges of democratic, modern and digitalised societies.”

Our thinking is that – much like in any other industry – what drives innovation and revolutionary technologies is competition. To remain healthy and even self-policing, however, this competition needs to embrace transparency, equity and inclusivity.

Last, but not least, researchers need to have the freedom to choose from plenty of options when deciding where and how to publish their work!

6 common mistakes at society and institutional journals that turn authors away

We understand that it might be tempting for managing editors at society and institutional journals to opt to stick to what has proved to be working again and again over the decades. “If it ain’t broke, don’t fix it”, right?

Yet, here comes the elephant in the room: science is all about staying ahead of your time and constantly evolving. 

Even though there are scientists who easily fall in love with the ink-scented charm of a century-old journal, there are many more who have long turned those down in favour of commercial journals that have never seen the pins of a commercial printing press. 

The reasons could be anything from the topic of their manuscripts missing from the otherwise extensive Scope and focus list, to an annoying submission portal that simply fails to deliver their cover letter to the right inbox. 

Don’t get us wrong: we do hold dear so many publication titles that have been around throughout our lives and before us. This is exactly why we felt like sharing a list of the most common mistakes – in our experience – that may distance today’s active and prolific scientists from smaller society and institutional journals.

Mistake 1:

Not following the trends in scholarly publishing

Given the high-tech and interconnected society that we are living in, it comes as no surprise that the past few decades have seen as many shifts and turns in how researchers produce, share and reuse their scientific outputs as the previous several generations put together.

From digital-first journals to Open Access by default; from PDF files to HTML articles enriched with relevant hyperlinked content and machine-interpretable publications; from seamlessly integrated preprints platforms to ‘alternative’ scientific publications from across the research process. The room for innovation in the academic publishing world seems as infinite as never before.

On the other hand, endless possibilities call for new requirements, policies and standards, which in turn should be updated, revised and replaced in no less timely manner. 

In a bid to bring down barriers to scientific knowledge, we have observed all key stakeholders – including major funders of research – demanding mandatory immediate open access to published research. Initiatives, such as the Plan S by cOAlition S and their call for publishers to communicate their APC policies publicly, for example, are making sure that scholarly publishing is as transparent as possible. 

Similarly, the OA Switchboard: a community-driven initiative with the mission to serve as a central information exchange hub between stakeholders about open access publications, makes it easier for both authors of research and journal owners to efficiently report to funders about how their resources are spent.

Today, amongst the key talking points you can find research integrity, including a wide range of internal practices and policies meant to prove the authenticity and trustworthiness of scholarly publishers and – by association – their journals and content. Another thing we will be hearing about more and more often is AI tools and assistants.

Failure to abide by the latest good practices and principles could mean that a journal appears abandoned, predatory or – in the case of legacy journals – possibly hijacked.

While it is tough to stay up to date with the latest trends, subscription to the newsletters and communication channels of the likes of OASPA (have you checked their Open Access journals toolkit yet?), cOAlition S and ISMTE are definitely a good place to start from.

Mistake 2:

Not revisiting journal websites content- and technology-wise

As they learn and research trends in the scholarly publishing world, journal managers need to be ready to carefully consider and apply those novelties that are either mandatory, advisable or useful for their own case. 

Additionally, they need to work closely with the editorial and customer support teams to stay alert for any repeated complaints and requests coming from their authors and other journal users. 

Today, for example, most online traffic happens on mobile devices, rather than desktop computers. So, is a journal’s website and its article layout (including PDFs) mobile-friendly? On the other hand, has the journal’s website been optimised enough to run smoothly even when working under the pressure of dozens of tabs open in the same browser?

Another area that needs continuous monitoring concerns journal policies and user guidelines. Are those up-to-date? Are they clear, easily accessible and efficiently communicated on the journal website?

From an academic perspective, is the journal’s scope and focus – as described on the website – explicitly mentioning today’s ‘hot’ and emerging areas of research in the field? Keep in mind that these topics do not only make a journal’s About section look attractive to the website visitor. These are the research topics where its potential authors are most likely investing their efforts in and where the funders of research spend their resources, as we speak.

An outdated technological infrastructure might create an impression of a dodgy publication title. Failure to find key information – including a journal’s Open Access policy or an exhaustive list of the research topics considered for publication – could be why potential authors turn down a journal upon their first website visit.

Mistake 3:

Not making the most of journal indexing

To have a journal indexed in as many major and relevant to its scientific field is not only a matter of prestige. 

Most importantly, making a journal’s content accessible from multiple sources – each frequented by its own users – naturally increases the likelihood that researchers will discover and later use and cite it in their own works.

Additionally, being able to access the journal from trusted and diligently maintained databases – such as the Directory of Open Access Journals (DOAJ) – is a reassurance for potential authors and readers that the journal is indeed authentic.

Of course, journal indexing is also a constantly evolving ecosystem. 

Relatively recent platforms like Altmetric and Dimensions were launched to track ‘alternative’ attention and usage of published research, including mentions on social media, news media and official documents – all of which fall outside the category of academic publications, but, nonetheless have their own remarkable societal impact.

The good news is that many indexers – including Altmetric and Dimensions – are integrated on a publisher-/platform-level, which means that journal managers and owners do not need to do anything to make their content more accessible and transparent, as long as their title is part of a professional scholarly publisher’s or a publishing platform’s portfolio.

However, there are databases like Scopus and Web of Science that demand from journals to submit their own applications. Usually, such application processes demand a considerable amount of manual input and efforts before the necessary steps are completed and the application – approved. 

Often, these processes take several years to complete, since journals may fail to cover the eligibility criteria for acceptance. In fact it is not rare for a journal to never qualify. Note that most major indexes impose embargo on journals that have been refused acceptance, so that they may take time to resolve their issues before reapplying a few years later. 

Failure to get a journal indexed by key scientific databases negatively impacts the discoverability and citability of its content. Further, it may also harm the reputation and even legitimacy of the title within academia.

Mistake 4:

Not catering for authors’ financial struggles

Funding scarcity and inequalities are a major concern within academia and the scientific world, but even more so in particular branches of science. Moreover, the issue cascades through all actors involved, including funders of research, research institutions, scientists, librarians, scholarly publishers and journal owners.

Unfortunately, it is way too common to have researchers turn away from their favourite journals – including those they have themselves committed to by becoming active editors or reviewers – due to inability to cover even a very reasonable article processing charge. 

No less unfortunate is the scenario where a privately working or underfunded scientist opts for a paywalled publication in a subscription or a hybrid journal that has essentially traded the public good for thousands of euro at a time.

On the other hand, scholarly publishing does incur various costs on the journal’s and the publisher’s sides as well, since the publishing and all related activities (e.g. production, indexation, dissemination and advertisement) – necessary for a journal and its content to retain quality, sustainability and relevance in the modern day – all demand a lot of technological resources, manual input and expertise.

A seemingly easy solution adopted by many large institutions is to sign up agreements with a few of the major publishing houses and (a selection of) their top titles. However, such practices only deepen the great divide, while killing off smaller journals that simply cannot handle their own annual costs. 

The ideal is to have enough resources provided by the institution or society behind the journal to run their journal(s) under a Diamond Open Access model, where both publishing and accessing publications are free to all by default.  

However, most institutions are themselves under substantial financial pressure, and need to work on a tight budget. Further, it is often impossible to estimate the publication volume of a journal within a time frame as short as the next calendar year.

A good solution in cases of limited budgets, is for a journal to work up its own model, where the available institutional resources either go for only a part of the APCs (but still enough to substantially help the authors!); a particular subset of authors (e.g. researchers affiliated with the institution); or, alternatively, finding options to navigate funds from already fully funded authors away to their less privileged peers. In the best-case scenario, any custom operational plan would remain flexible in case of a major change in circumstances.

On top of more or less standard waivers and discounts available to, for example, authors from developing countries (according to the World Bank) and retired scientists, we highly recommend journals to provide additional waivers for additional groups of underprivileged authors, such as unemployed, early career researchers or otherwise marginalised groups (e.g. political immigrants). A good practice we often recommend to client journals is to pledge loyalty to their journal users by regularly providing APC waivers as a recognition for their continuous contributions.  

Mistake 5:

Not engaging with the editors

Apart from its name appearing in the most trustworthy databases, a journal catches the eye of new authors thanks to its ambassadors. In a world more or less run by popular influencers, it comes as no surprise that a high-profile scientist who takes a stand either for or against a particular publication title can easily tip the scales for a hesitant colleague.

Now, think about all editors at a journal. Given they have already agreed to commit their time and work to it, they must be already fond of it, don’t they? Then, there are all those experts affiliated with the institution or society behind the journal. Even if not necessarily involved in the editorial work, they must also be fans and friends of the journal by association. 

Caption: Editor-in-Chief Prof Dr Benjamin Burkhard and Deputy Editor-in-Chief Prof Davide Geneletti wearing One Ecosystem-branded T-shirts at the Ecosystem Services Partnership World Conference (Hannover, 2019).   

So, here you have a whole community ready and happy to advocate for the journal if given the chance and a simple reminder that a few words of theirs would go a long way. Further, all of them have their own professional fellowship, which often includes dozens of budding early-career researchers who are looking up to them as mentors.

That said, way too often we see good legacy journals that are simply not reaping the benefits of the community they have already created. We cannot stress it enough how crucial it is to regularly invoke that sense of community among journal editors. 

At the end of the day, a journal’s management team is in the best position to act as a link between the journal and its editors, as well as the publisher and its marketing team, who should be able to assist any communication efforts with the right platforms, tools and resources.

If a journal is not efficiently tapping into its immediate network of advocates and ambassadors, it does not only miss out on a great opportunity to extend its network of loyal readers and authors. Indeed, it may be even risking losing its ground within its very own affiliates. If it was a good publication source, it would have been supported by at least its in-house team, wouldn’t it?

Mistake 6:

Not having a varied communication strategy

Speaking of awareness – or the lack of it, thereof – we are also sad to see many society and institutional journals overlooking the communication of scientific content to their journal’s immediate audiences, as well as the public at large.

On one hand, there is the issue of other experts duplicating others’ efforts by simply not being aware of their colleagues’ work, since they have not run into that particular study at the time of writing. On the other, there’s the layperson that is way too often falling into the ‘fake news’ trap, all because the relevant science has failed to make it to the appropriate news media channels.

Given the overwhelming volume of scholarly as well as popular science information, it is the primary source of the content that needs to take measures to efficiently communicate it to the interested audiences.

After all, simply having research findings ingested by academic databases is rarely enough to reach scientists in the field who are not actively working at this time, thus not spending enough time querying those aggregates. Similarly, one cannot rely on a layperson to fully comprehend scientific jargon, even if they wish to double-check a random science-y claim on the Internet with its original source.

Plant biologists and science communicator Dr Molly Edwards (@science_irl) speaking about an academic paper published in the botany scientific journal PhytoKeys.

Alternatively, when scientists stumble across attractive findings while scrolling down on social media in their free time, they might be more likely to think of the same paper next time they are working on their own studies.

Meanwhile, laypeople might be less likely to blindly trust information about the latest medical breakthrough coming from a stranger on the Internet if they had already read about the research behind the story in several trusted news media outlets, who have verified their news stories. 

Dr Alice Laciny speaking about a new species of “exploding ant” that her team described in the zoology journal ZooKeys in a podcast by the BBC.

Failure to actively and efficiently communicate content published in the journal using various platforms (e.g. journal newsletters, dedicated social media accounts, press announcements, scientific conferences) and the appropriate for their audiences language might pave the way for large-scale misinformation, in addition to decreased discoverability and citability of published content, and journals at large.

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ARPHA Platform was designed to provide a highly flexible, customisable and accessible end-to-end publishing solution specially targeted at smaller journals run by scientific institutions and societies. In ARPHA, client journals and their journal managers will find a complete set of highly automated and manually provided services meant to assist societies and institutions in the production, but also in the management and further development of their journals. We invite you to explore our wide range of services on the ARPHA website.

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For news from & about ARPHA and the journals using the platform, you can follow us on Twitter and Linkedin.

Eye for Detail: Papers in Pensoft journals sport a new look

Readers at some of the journals published by Pensoft, who have downloaded/printed a publication or ordered a physical copy of a journal issue over the last few weeks, might be in for a surprise concerning the layout of the PDF format of the articles. 

Research papers published in ZooKeys demonstrating the former (left) and the current (right) article layout seen in the PDF format. 

Even though it’s been years since online publishing has become the norm in how we are consuming information – including scientific publications – we understand that academia is still very much fond of traditional, often paper-based, article layout format: the one you use when accessing a PDF file or a print copy, rather than directly scrolling down through the HTML version of the article. 

Even if today large orders of printed volumes from overseas are the exception, rather than the rule, we know we have readers of ours who regularly print manuscripts at home or savе them on their devices. Trends like this have already led to many journals first abandoning the physical- for digital-first, then transitioning to digital-only publication format.

Meanwhile, it is true that needs and demands have fundamentally changed in recent times. 

As we speak, readers are accessing PDF files from much higher-quality desktops, in order to skim through as much content as possible. 

In the meantime, authors are relying on greater-quality cameras to document their discoveries, while using advanced computational tools capable of generating and analysing extra layers of precise data. While producing more exhaustive research, however, it is also of key importance that their manuscripts are processed and published as rapidly as possible.

So, let’s run through the updates and give you our reasoning for their added value to readers and authors.

Revised opening page

One of the major changes is the one to the format of the first page. By leaving some blank space on the left, we found a dedicated place for important article metadata, i.e. academic editor, date of manuscript submission / acceptance / publication, citation details and licence. As a result, we “cleaned up” the upper part of the page, so that it can better highlight the authors and their affiliations. 

Bottom line: The new layout provides a better structure to the opening page to let readers find key article metadata at a glance. 

Expand as much – or as little – as comfortable

As you might know, journals published by Pensoft have been coming in different formats and sizes. Now, we have introduced the standard A4 page size, where the text is laid in a single column that has been slightly indented to the right, as seen above. Whenever a figure or a table is used in a manuscript, however, it is expanded onto the whole width of the page.

Before giving our reasons why, let’s see what were the specific problems that we address.

Case study 1

Some of our signature journals, including ZooKeys, PhytoKeys and MycoKeys, have become quite recognisable with their smaller-than-average B5 format, widely appreciated by people who would often be seen carrying around a copy during a conference or an international flight.

However, in recent times, authors began to embrace good practices in research like open sharing of data and code, which resulted in larger and more complex tables. Similarly, their pocket-sized cameras would capture much higher-resolution photos capable of revealing otherwise minute morphological characters. Smaller page size would also mean that often there would be pages between an in-text reference of a figure or a table and the visual itself.

So, here we faced an obvious question: shall we deprive their readers from all those detailed insights into the published studies?

Case study 2

Meanwhile, other journals, such as Herpetozoa, Zoosystematics and Evolution and Deutsche Entomologische Zeitschrift, had long been operating in A4 size, thereby providing their readers with a full view of the figures in their publications. 

Yet, the A4 format brought up another issue: the lines were too long for the eye comfort of their readers. 

What they did was organise their pages into two-column format. While this sounds like a good and quite obvious decision, the format – best known from print newspapers – is pretty inconvenient when accessed digitally. Since the readers would like to zoom in on the PDF page or simply access the article on mobile, they will need to scroll up and down several times per page. 

In addition, the production of a two-column text is technologically more challenging, which results in extra production time.

Bottom line: The new layout allows journals to not sacrifice image quality for text readability and vice versa. As a bonus, authors enjoy faster publication for their papers.

Simplified font

If you have a closer look at the PDF file, you would notice that print-ready papers have also switched to a more simplistic – yet easier to the eye – font. Again, the update corresponds to today’s digital-native user behaviour, where readers often access PDF files from devices of various resolutions and skim through the text, as opposed to studying its content in detail.

In fact, the change is hardly new, since the same font has long been utilised for the webpages (HTML format) of the publications across all journals.

Bottom line: The slightly rounder and simplified font prompts readability, thereby allowing for faster and increased consumption of content. 

What’s the catch? How about characters and APCs?

While we have been receiving a lot of positive feedback from editors, authors and readers, there has been a concern that the updates would increase the publication charges, wherever these are estimated based on page numbers.

Having calculated the lines and characters in the new layout format, we would like to assure you that there is no increase in the numbers of characters or words between the former and current layout formats. In fact, due to the additional number of lines fitting in an A4 page as opposed to B5, authors might be even up for a deal.

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For news from & about ARPHA and the journals using the platform, you can follow us on Twitter and Linkedin.

New ARPHA features strengthen journal communities

Long past are the days where a journal’s role was to merely provide a means to getting a piece of research work out of a drawer and into the wide world. Today, a modern journal with demonstrable online presence and a distinct ‘character’ may as well be seen as a social network in its own right, which brings together a community of frequent readers, authors, reviewers and dedicated editors.

At ARPHA, we believe that this is the time to support and give voice to these very special communities by getting to know each other and sharing and celebrating their achievements. After all, it’s strong and active communities that foster collaboration, recognition and real-life impact.

Revamped journal newsletters

Newsletter from PhytoKeys emailed to journal users subscribed for article alerts.

Journal readers subscribe to New Article alerts to stay updated about new research papers as they are published in a trusted scholarly outlet. Yet, having subscribed to notifications from a particular title – or a selection of similar titles – means that those users – typically authors, editors or active researchers in the field – might also be interested in learning about the journal’s latest Scopus CitesCore or Impact Factor; article collections calling for contributions; or new additions to the editorial board. All of these could be extremely useful to consider before submitting a paper, applying for the editorial board or simply updating a “to-read” list.

Thanks to the visually appealing look and clickable section tabs, newsletter subscribers can easily navigate through the email and explore its content at a glance.

Find instructions about how to update your profile and set up your email alerts in the ARPHA Manual.

‘Post your news’ button

Prof Christopher John Topping introduced himself with a meet-and-greet at the time of joining the newly renovated Food and Ecological Systems Modelling Journal as a co-Editor-in-Chief.

As wholesome communication is a two-way experience, we decided to support journals published on ARPHA in setting up the stage for their users to voice their activities. By adopting the Post your news button, many of the journals introduced a simple form accessible to registered users, where they can update the community about basically everything that’s relevant to the journal and its scope. 

Particularly, the feature is useful to introduce new members of the editorial board; seek out collaborators; promote an upcoming scientific event; or celebrate the far-reaching impact and recognition of one’s research work published in the journal. Once approved by a moderator, the news item is featured in the journal’s designated News section on its website’s homepage and its newsletter.

Find instructions about how to submit a news item and how submitted news items are moderated.

Editors’ Choice badges

Every quarter, the Editors-in-Chief at Vegetation Classification and Survey (VCS) recognise one paper as an “Editor’s Choice”, and an yearly award is presented at the end of each year.

A simple, yet effective way to celebrate the impact of a particular publication is having the journal’s editors pinpoint the paper as an Editor’s choice. While many journals have traditionally been awarding articles and their authors with similar recognitions, it is not often that anyone is aware of those outside of the editorial board and the awardees themselves.

As a practical solution, we introduced customisable badges that can be added next to an article’s title, and allow a journal’s editors to highlight the best contributions.

Find instructions for editors on how to add badges to published articles.

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